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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli1g00210 ATGGCTATAACTATAAGCTATAGCCTTTTTCTTACTTTTTATTTTCTCCCATCTCATTTTGATATATCATATGCTATAACATGTGCAAATCACAAATTCACATCTAATAGAATCTACACTTCTTGTAAAGATTTGCCCCATTTACAAGCTAAGCTTCATTGGACCTACAACTCGACTGTAGGTGTAGCCAAGATCGCGTACCGTGCCCGACAAGGTGCGGGCGGTTGGGTCGCATGGGCCATCAACCCGAACCAAATAGGTATGGTTGGGTCAGAAGCATTGGTGGCTTTTGTCAACAACAATGGAGGTGTGACAGTATATCCAACGATGATTACTAGTTACAGCCCATCGATGCTACCAGCTGATCTTAGCTTTCGGGTTTCGGGCCTCTCTGCTGAGTTTTTGAATAACGAGATCACCATTTACGCGACCGTGGGCCCGTTTGGAGGCGGGTCGGTTGTTAATCAAGTATGGCAAGCTGGGAATTTGGTTATAGATGGTGTCCCTCAAATGCATGCTGTTTCTCAACAAAATCTTCAATCAACAGGGGAGCTTGATTTCTCGTCTGATTAG 573 43.98 MAITISYSLFLTFYFLPSHFDISYAITCANHKFTSNRIYTSCKDLPHLQAKLHWTYNSTVGVAKIAYRARQGAGGWVAWAINPNQIGMVGSEALVAFVNNNGGVTVYPTMITSYSPSMLPADLSFRVSGLSAEFLNNEITIYATVGPFGGGSVVNQVWQAGNLVIDGVPQMHAVSQQNLQSTGELDFSSD 190
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli1g00210 190 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 7 189 - -
Fli1g00210 190 CDD DOMON-CIL1-like 39 189 IPR045265 -
Fli1g00210 190 ProSiteProfiles DOMON domain profile. 48 161 IPR005018 -
Fli1g00210 190 Pfam Protein of unknown function (DUF568) 88 187 IPR045265 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli1g00210 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr1:4365071 Fli7g01579 Fli-Chr7:79614287 dispersed
Fli Fli-Chr1:4354793 Fli1g00210 Fli-Chr1:4365071 tandem