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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli1g00225 ATGCGTGGACCTAGGGCTAGTGCGGTTCACTTTGGGAAATGTGGGTTGCACCAGGGCCAAGGGGAAAACAGTGTTTGTGTGGACAACGGTGTGGTGAACATCGACACTGAAGAGATTGACAAGGTTGTTAATATTAAACCCGAGTGGGGCGTGCACGTGATAAGCAATCAAGATGGGTATCAAGCAGGATTTAGAGGGTGGGGTGGATGGGGAGATAAAAGAGATCATCAATTGTGTTTGGACTTTGCTAAGATGTACCATGTGAGGAGCAAAACGTCTTGA 282 47.52 MRGPRASAVHFGKCGLHQGQGENSVCVDNGVVNIDTEEIDKVVNIKPEWGVHVISNQDGYQAGFRGWGGWGDKRDHQLCLDFAKMYHVRSKTS 93
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli1g00225 93 Pfam N-acetylglucosaminyltransferase II (MGAT2) 3 79 IPR007754 GO:0005795(InterPro)|GO:0008455(InterPro)|GO:0009312(InterPro)|GO:0016020(InterPro)
Fli1g00225 93 PANTHER BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE II 1 88 IPR007754 GO:0000139(PANTHER)|GO:0005795(InterPro)|GO:0006487(PANTHER)|GO:0008455(PANTHER)|GO:0008455(InterPro)|GO:0009312(InterPro)|GO:0016020(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli1g00225 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr1:4618424 Fli1g00231 Fli-Chr1:4696702 proximal