AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli1g00235 ATGGCGGCAATACTGGCTTCTAACAGCTGCTATTGCCGTGATGTGGAATTGGTGAATCAAGGGAGAACAGCAGATAATCTCAGCTTCTCAAAATCGGTTTCTAATCAGAAGCTAGATAGGCGTGAATGTACCTCGAATTCGCCTAAATTTGAGAGATGCCGCAGGTTTCATGTTCAGATGCAGCAGACGGAATCACCCATGACATTTGGCACCAATGGTCGGCCCGCGAAGGTTTATACAAATGGTCAGCCTGTGAAGTTGGGTGCCAATGGGAAGCCAGTGAATTTGGCTACCAATGGTCAGCCCATGAAGTTGGGAAGCAAAGGTCAACCGATCACCATGGTTCCCATCAGTGAGGTGGTGAATATTAAACATAGGTCGGAAAAAGGATCAGGAACAGTGAATGGATCGATACAAGTTGTTAATGGAACAAGTCTTGTTAAGAGAGAAATCACACCACCACTAGTTAAGTCTGTTAAAGTTAAAGAACCTACGGGATTCCAACCTGAAGAATATAGGGTCTTGCCATCGGATGAAAGTTTCAAATGGGCAAATGAAAATTATAACTCAGTACATAGATCAATAGATGTGTGGTCTTTTGTTTTGTTTTTTCACGTTCGAGTTCTACTTGACAATGCAAAGTGGGCATATCTTGGTTCCTTCACAGAAGAAAAACAGAAAAAGAGAAGAAGAAAAACAGCTTCATGGTTAAGAGAACGTGTGCTTCAACTTGGTCCAACTTTTATAAAACTTGGCCAATTAGTCTCATCAAGATCAGATTTATTTCCACATGAATTAGTTGATGAACTCGCCAAGTTACAGGACAGAGTACCAGCCTTCTCATCAGCAAAAGCAAAAGGTTTTATTGAGAAAGAACTAGGAGCTCCGATTGATGTACTCTTCAGGGAATTTGAAGAACAACCTATTGCAGCTGCTAGTCTTGGTCAGGTACATCGTGCAATATTGCATAATGGAGAGAAAGTAATCGTTAAAGTTCAAAGACCTGGTTTGAAGAAACTATTTGACATTGATTTACGAAATTTAAAGTTAGTTGCAGAGTATTTTCAAAGAAGTGAAACTCTCGGTGGTCCTACAAAGGATTGGATAGGTATCTATAATGAATGTGAAAAGATTTTATACCAGGAGATCGATTATATAAATGAAGGGAAAAATGCTGATAAATTTCGTCGAGATTTTCGTAATATAAAGTGGGTCCGAGTGCCTCAAGTATTCTGGGATTATACTGCAACCAAGGTGCTGACATTGGAGTATGTTCCAGGCATTAAAATCAACAATTTAGATGGGATAAAACAAAGGGGTTATAGTCGATCTCTCATCTCTTCACGTGCCATTGAATCATACTTGATTCAGATACTGAAAACAGGCTTCTTTCATGCCGATCCTCATCCTGGAAATCTTGCTATTGATGCGGATGAATCATTAATCTACTATGATTTGGTATGA 1464 39.69 MAAILASNSCYCRDVELVNQGRTADNLSFSKSVSNQKLDRRECTSNSPKFERCRRFHVQMQQTESPMTFGTNGRPAKVYTNGQPVKLGANGKPVNLATNGQPMKLGSKGQPITMVPISEVVNIKHRSEKGSGTVNGSIQVVNGTSLVKREITPPLVKSVKVKEPTGFQPEEYRVLPSDESFKWANENYNSVHRSIDVWSFVLFFHVRVLLDNAKWAYLGSFTEEKQKKRRRKTASWLRERVLQLGPTFIKLGQLVSSRSDLFPHELVDELAKLQDRVPAFSSAKAKGFIEKELGAPIDVLFREFEEQPIAAASLGQVHRAILHNGEKVIVKVQRPGLKKLFDIDLRNLKLVAEYFQRSETLGGPTKDWIGIYNECEKILYQEIDYINEGKNADKFRRDFRNIKWVRVPQVFWDYTATKVLTLEYVPGIKINNLDGIKQRGYSRSLISSRAIESYLIQILKTGFFHADPHPGNLAIDADESLIYYDLV 487
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli1g00235 487 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 93 485 IPR050154 GO:0046467(PANTHER)|GO:0055072(PANTHER)|GO:1901031(PANTHER)
Fli1g00235 487 CDD ABC1-ADCK3-like 272 486 - -
Fli1g00235 487 Pfam ABC1 atypical kinase-like domain 272 485 IPR004147 -
Fli1g00235 487 SUPERFAMILY Protein kinase-like (PK-like) 274 483 IPR011009 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli1g00235 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr1:4762019 Fli5g00069 Fli-Chr5:1189357 dispersed
Fli Fli-Chr1:4762019 Fli14g01725 Fli-Chr14:57979626 transposed