AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli1g00244 ATGAGTGGGGGTAAGGTTTCCATTCCGAACAATGTGAGGAAGACGATCGAGAACATCAAGGAGATCACAGGTAATCACAGTGAAGATGAGATATATGCAATGCTTAAAGATTGTTCTATGGATCCGAACGAGACCGTTCAGAAGCTTCTCTTGCAGGATCCATTTCATGAAGTTAAGAGGAAACGTGACCGCAAGAAAGAGAATGTGAATAAAGAACCTACGGAGTCCAGATGGAAACCTGGGATGCAGGGAAGGGGGAACAGGGGTGGCAGGTCGAACTACTCGTCTCGTCGCATTTCTAATGATGTAGGTGGTGGCAAGCCATTACTTTCTGTAAAGGAAAATGGAATGAGTAAAGGTGCAGATGATGGTCCAAATCAGTCAATGCCTCAGGGTCAGAAGAATAAAGAGACATTTGTGGTTAAAAGCCCTTCCCATGATGTACCCGATGGAACTGCACATTCCTCTGTGGGAAGTGATGAGAAGAAATCTGTAGCGGTTCCTGCTGTTGAGGCAAGTAAGGAACCCGCTGTTGGTGATAGTCATGGAACCCTCATCTCGAGTGTCAATGAAACATCAGCTTCTACTTCTAAGACACCATCACCTTCACTAGGGTTACAATTGTCTGATAAAGATCCTATTCTGAAGCCTTCACAAGATTCACAGCTCCTTGTGGGTACAATGAGACGTGAAGTTGGGAGTCAACAAACTCTTGTTGACCAAATTCACAAGACTCCCCTTGAGACTGAATCAACTGCAGCTGGTTCTGAGGTTGGAACCTCCTCCGTGCAAGGGAAGGCACAATCTTCTCATGTCCCACTTTCAATTTCCAGGCCTTCTTCAAACTATAATAATAGGCAGCAACAAGCAATTGGGCCTCAAAAAGGTCCGAGTATGGAATGGAAACCAAAACCAACAAATCCAGTTCTTGCTCAAGGGACCGGGTCAACTGAGCCAGTTAAGGTGCATGTGGTTCAAGTTGAAAGTCAAACTCCAAACCTGTTTGCAGCCCGTAATCTTGATTTAAAGGGCACGGTGCATGGGCTGGAGAAGAAGCTAGAGGAATCACACATTTCAGATGACCAACATGTTATTATTCCAAATCACCTCCATGTTCCTGAAGCTGAAAAACTCGGGTTCTATTTTGGGAGTTTTGATGCCAGCTTTAGTCTTAACATGACCTCCTCGAACGTGTCTGGGCCTGGGCTCGGGGCTGAGCACGTGAGTGACAAGAGTTCCGAGGCTTCTGAGGTACTTGATGAAAGTATAGACGAGCAGCCCAGAGATCAAAATAATGCGTTGGCAAGTGCCGATGATGAAGACCATCTTGATCATCCATCATCATCTGATAACATACCCGAGAATCTATCAGCCGAAGGTGACGTGTCATCAAATTCAGGCTTCAATCACCAAGAATCCAAACAAGAGAATTCACTTCCAACAGCAAGCCATCAACACCCGATTCTTCACACGTCTCCTAACTTAAGTTTTGGCTTCATTCCTCCAATAATTGGGACCCACCCAGCATCTTTTGAGACCAACGAGTCTCATAGTCATGATGGTTCACAAGTCCCAAATGTTGTAGTTCAGCAACCATTTGACCCAGCAAGCTATTATGCTCAATTTTATCGTCCTGGTGCTGACGTGGATGGCCGCATGTCACCCTTTCATTCAACCGGGGTTCCAACCAAGTTTAATGGAAATATTCCTGTGTTATCTCCTCAGGCTTCTCATTCTTCTCAAGAGGTTGGGAACTCATTGATGTTATCTGGTGCTGGTCCAACCCCAATACCCACTACACAAACTGGCGGATTTATGCAAACCTCCATAGCCATGACTCAGCAACCATTACCCATTTTCAGGCAACCAACTGGAGTTCATTTACCACATTACCCTCCAAATTATATCCCATACGGACCATATTTCCCACCATTTTATGTTCCTCCACCAGCTATCCATCAATTTTTGAGTAATAATACATTCCCACAACCTCCTCAAGCTGGTAGTATGTACCCGCCCCCACCAGTGGCTAGCTCTAAATACCCACTTCCACAATACAAAACGGGTGGTAATACAGGGAACCTGGTGAATATTGGAATGCCCGGAAGCTATGGACCGTATGGCTTAAACGCAGCTGGCTATAACTCTGGTTCAGCAGCTACAGCTGGCAATTCAACTTCTGATGAAGACCTAGGTGGGTCCCAGTTTAAGGAAAGTAATGTCTACATTACTGGACAGCAGAGTGAAGGTTCAGGTGTATGGATGGCTGCACCGGGTCGAGACATATCTGGTATGCAGGCTAATTCTTTCTATAACATTCCTCAAGGCGGTCAAGTTGCATATACGCCAACACAAGCCGGCCATGGGACTTTCACCAGTCTTTATCACCACCCGGCTCAACCAGTAACCACCAGTGCGGTTCACCCACTTCTCCAACAGTCCCATGGACCCAGCGTTGACATGGCAGGACCCACACCTCAAATCAACTGGCCTAATAACTACTGA 2505 46.03 MSGGKVSIPNNVRKTIENIKEITGNHSEDEIYAMLKDCSMDPNETVQKLLLQDPFHEVKRKRDRKKENVNKEPTESRWKPGMQGRGNRGGRSNYSSRRISNDVGGGKPLLSVKENGMSKGADDGPNQSMPQGQKNKETFVVKSPSHDVPDGTAHSSVGSDEKKSVAVPAVEASKEPAVGDSHGTLISSVNETSASTSKTPSPSLGLQLSDKDPILKPSQDSQLLVGTMRREVGSQQTLVDQIHKTPLETESTAAGSEVGTSSVQGKAQSSHVPLSISRPSSNYNNRQQQAIGPQKGPSMEWKPKPTNPVLAQGTGSTEPVKVHVVQVESQTPNLFAARNLDLKGTVHGLEKKLEESHISDDQHVIIPNHLHVPEAEKLGFYFGSFDASFSLNMTSSNVSGPGLGAEHVSDKSSEASEVLDESIDEQPRDQNNALASADDEDHLDHPSSSDNIPENLSAEGDVSSNSGFNHQESKQENSLPTASHQHPILHTSPNLSFGFIPPIIGTHPASFETNESHSHDGSQVPNVVVQQPFDPASYYAQFYRPGADVDGRMSPFHSTGVPTKFNGNIPVLSPQASHSSQEVGNSLMLSGAGPTPIPTTQTGGFMQTSIAMTQQPLPIFRQPTGVHLPHYPPNYIPYGPYFPPFYVPPPAIHQFLSNNTFPQPPQAGSMYPPPPVASSKYPLPQYKTGGNTGNLVNIGMPGSYGPYGLNAAGYNSGSAATAGNSTSDEDLGGSQFKESNVYITGQQSEGSGVWMAAPGRDISGMQANSFYNIPQGGQVAYTPTQAGHGTFTSLYHHPAQPVTTSAVHPLLQQSHGPSVDMAGPTPQINWPNNY 834
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli1g00244 834 MobiDBLite consensus disorder prediction 57 217 - -
Fli1g00244 834 MobiDBLite consensus disorder prediction 183 206 - -
Fli1g00244 834 MobiDBLite consensus disorder prediction 410 427 - -
Fli1g00244 834 MobiDBLite consensus disorder prediction 401 492 - -
Fli1g00244 834 PANTHER FLOCCULATION PROTEIN (DUF1296) 1 834 IPR044277 GO:0051082(PANTHER)
Fli1g00244 834 MobiDBLite consensus disorder prediction 243 309 - -
Fli1g00244 834 MobiDBLite consensus disorder prediction 121 139 - -
Fli1g00244 834 Pfam GBF-interacting protein 1 N-terminal 8 67 IPR009719 -
Fli1g00244 834 MobiDBLite consensus disorder prediction 57 74 - -
Fli1g00244 834 MobiDBLite consensus disorder prediction 243 294 - -
Fli1g00244 834 SUPERFAMILY UBA-like 8 70 IPR009060 GO:0005515(InterPro)
Fli1g00244 834 MobiDBLite consensus disorder prediction 449 492 - -
Fli1g00244 834 MobiDBLite consensus disorder prediction 434 448 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli1g00244 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr1:4832045 Fli2g00040 Fli-Chr2:934306 dispersed