AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fli1g00311 | ATGGCGGCTTCTGCAGAACGTGAAAACTTCATCTATGTCGCTAAGCTTGCGGAACAAGCCGAACGCTATGACGAGATGGTGGATGCCATGAAGAAAGTAGCAAATTTGGATGTCGAATTAACTGTTGAGGAGAGAAATTTGCTGTCAGTTGGATACAAGAATGTGGTGGGTTCACGTAGGGCATCATGGAGGATACTGTCTTCCATTCAGCAAAAAGAGGAGTCAAGAGGCAATGAAGTTAATGTAAAGCGGATTAAGGAATATAGGCAGAAGGTGGAAACCGAGCTGTCTAATATTTGCAATGATATCATGACTGTGATCGATGAGCATCTGATTCCATCTTCCTCCGCTGGAGAATCTACTGTTTTCTACTACAAGATGAAAGGGGACTATTATAGGTATCTTGCAGAGTTCAAGTCTGGTGATGACAAAAAAGAAGCAGCTGATCTGTCACTGAAGGCTTATGAATCGGCTTCTACTGCTGCAAAGGATTTATCTCCTACTCATCCCATCCGACTGGGCTTGGCTTTGAACTTCTCGGTTTTCTATTATGAGATCATGAACTCTCCTGAAAGAGCCTGCCACCTGGCAAAACAAGCTTTTGATGAAGCTATCTCAGAACTTGACTCTTTGAGTGAGGAGTCATACAAAGATAGCACTTTGATTATGCAGCTCCTGAGGGACAACCTTACTTTGTGGACTTCTGACATTCCAGAGGATGGAGAAGACCAAAAGATGGAGATCACCAAATCTGGTGCAGAAGACGCCAAGTAA | 774 | 43.54 | MAASAERENFIYVAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVVGSRRASWRILSSIQQKEESRGNEVNVKRIKEYRQKVETELSNICNDIMTVIDEHLIPSSSAGESTVFYYKMKGDYYRYLAEFKSGDDKKEAADLSLKAYESASTAAKDLSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDQKMEITKSGAEDAK | 257 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fli1g00311 | 257 | FunFam | 14-3-3 protein epsilon | 2 | 247 | - | - | |
| Fli1g00311 | 257 | MobiDBLite | consensus disorder prediction | 236 | 257 | - | - | |
| Fli1g00311 | 257 | Pfam | 14-3-3 protein | 14 | 234 | IPR023410 | - | |
| Fli1g00311 | 257 | PIRSF | 14-3-3 | 1 | 246 | IPR000308 | - | |
| Fli1g00311 | 257 | Gene3D | - | 1 | 249 | IPR036815 | - | |
| Fli1g00311 | 257 | ProSitePatterns | 14-3-3 proteins signature 1. | 45 | 55 | IPR023409 | - | |
| Fli1g00311 | 257 | Coils | Coil | 194 | 214 | - | - | |
| Fli1g00311 | 257 | SMART | 1433-4 | 7 | 247 | IPR023410 | - | |
| Fli1g00311 | 257 | ProSitePatterns | 14-3-3 proteins signature 2. | 216 | 235 | IPR023409 | - | |
| Fli1g00311 | 257 | PRINTS | 14-3-3 protein zeta signature | 39 | 68 | IPR000308 | - | |
| Fli1g00311 | 257 | PRINTS | 14-3-3 protein zeta signature | 88 | 112 | IPR000308 | - | |
| Fli1g00311 | 257 | PRINTS | 14-3-3 protein zeta signature | 153 | 179 | IPR000308 | - | |
| Fli1g00311 | 257 | PRINTS | 14-3-3 protein zeta signature | 207 | 236 | IPR000308 | - | |
| Fli1g00311 | 257 | PRINTS | 14-3-3 protein zeta signature | 180 | 206 | IPR000308 | - | |
| Fli1g00311 | 257 | PRINTS | 14-3-3 protein zeta signature | 119 | 141 | IPR000308 | - | |
| Fli1g00311 | 257 | MobiDBLite | consensus disorder prediction | 238 | 257 | - | - | |
| Fli1g00311 | 257 | PANTHER | 14-3-3 PROTEIN | 6 | 239 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
| Fli1g00311 | 257 | SUPERFAMILY | 14-3-3 protein | 6 | 236 | IPR036815 | - | |
| Fli1g00311 | 257 | Coils | Coil | 13 | 33 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fli1g00311 | K06630 | 14-3-3 protein epsilon |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 88307 | Fli18g00670 | Fli1g00311 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fli | Fli-Chr18:34973031 | Fli1g00311 | Fli-Chr1:6388138 | dispersed | |
| Fli | Fli-Chr1:6388138 | Fli2g01762 | Fli-Chr2:32191547 | dispersed | |
| Fli | Fli-Chr9:3880088 | Fli1g00311 | Fli-Chr1:6388138 | transposed | |
| Fli | Fli-Chr1:6388138 | Fli14g01679 | Fli-Chr14:55416826 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Fli1g00311 | ACH | 9 | 261 | 14-3-3 family | AT1G26480 | 76.285 | 3.04e-147 | 410.0 | |
| Fli2g00970 | WGDA | 2 | 252 | 14-3-3 family | AT5G38480 | 86.853 | 6.31e-166 | 457.0 | |
| Fli2g01762 | ACH | 1 | 244 | 14-3-3 family | AT2G42590 | 78.689 | 3.08e-144 | 402.0 | |
| Fli2g03067 | . | 4 | 247 | 14-3-3 family | AT5G65430 | 86.885 | 1.74e-161 | 446.0 | |
| Fli5g00495 | . | 6 | 264 | 14-3-3 family | AT1G26480 | 84.17 | 7.06e-163 | 450.0 | |
| Fli5g01802 | . | 3 | 259 | 14-3-3 family | AT1G78300 | 86.77 | 7.14e-165 | 455.0 | |
| Fli6g01098 | . | 2 | 256 | 14-3-3 family | AT1G78300 | 87.109 | 1.25e-163 | 451.0 | |
| Fli6g01385 | . | 3 | 257 | 14-3-3 family | AT3G02520 | 87.451 | 2.49e-164 | 454.0 | |
| Fli8g00145 | . | 6 | 264 | 14-3-3 family | AT1G26480 | 82.239 | 1.62e-160 | 444.0 | |
| Fli9g00183 | . | 24 | 152 | 14-3-3 family | AT1G34760 | 79.07 | 3.50e-73 | 217.0 | |
| Fli11g02376 | . | 2 | 259 | 14-3-3 family | AT1G78300 | 87.645 | 6.47e-167 | 460.0 | |
| Fli12g01817 | WGDA | 6 | 263 | 14-3-3 family | AT2G42590 | 77.22 | 1.35e-147 | 411.0 | |
| Fli14g00501 | ACH,WGDA | 6 | 263 | 14-3-3 family | AT2G42590 | 77.22 | 1.50e-147 | 411.0 | |
| Fli14g01679 | . | 1 | 263 | 14-3-3 family | AT2G42590 | 76.806 | 7.45e-150 | 417.0 | |
| Fli16g00450 | . | 2 | 256 | 14-3-3 family | AT1G78300 | 85.938 | 1.57e-161 | 446.0 | |
| Fli16g01019 | WGDA | 3 | 254 | 14-3-3 family | AT3G02520 | 87.698 | 5.91e-164 | 452.0 | |
| Fli17g00388 | . | 24 | 144 | 14-3-3 family | AT1G34760 | 75.207 | 2.90e-65 | 196.0 | |
| Fli18g00670 | ACH | 1 | 249 | 14-3-3 family | AT2G42590 | 78.313 | 1.66e-148 | 414.0 | |
| Fli10000292.1g00005 | . | 1 | 96 | 14-3-3 family | AT2G42590 | 76.042 | 2.20e-48 | 152.0 | |
| Fli10000106.1g00002 | . | 4 | 247 | 14-3-3 family | AT5G65430 | 86.885 | 1.74e-161 | 446.0 | |
| Fli10000490.1g00003 | . | 1 | 203 | 14-3-3 family | AT5G10450 | 82.759 | 2.42e-126 | 355.0 | |
| Fli10000412.1g00002 | . | 2 | 256 | 14-3-3 family | AT1G78300 | 87.109 | 1.25e-163 | 451.0 |