AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fli1g00321 | ATGGATTCAGGGGTGTTAGATGCGGTTAGAATAAGCAAAGGGAGGAGTAAGTGGGGTGAAGGTAGTAAAGTGTATACACGAAGGGTTAAAACCACCACCACCAACACCACCAACACCACCACCACCGCCATCACCGCCACCGTCGCCGCCGCGGCGTCCGCCTCTTCTCCGACCCCTACAGCTACCGTCACCGCCGCTTCTCCAACAACCACCCCAAATAATGGTCAAACCCTAGCTACAGAGCTCGCAAATTATGAAATTCGAAGTACTTTATCGCCCGTTGTAGAGGCGTTTGATGATCATTCCGTTCGGGAGGCCCCCGGAAACGGGGTGGTAAAACCGGTTGTTGTCGTGGTGGATGGTCGGGTGAGGATTAATGTACGAGCTGCGAAGGCGGCTAAGAATGAAGTTATTGAGCTTATGGAGACGATGAAAGCTGAGCTTGAACGGGTCCGACGTGTAGCTCAGAGGCTTGAGGATAAAGAAGCTGAGCTAACTGCGTTTTCGACCGTTGATGGTGTTGCTGGCGACGGTGATGGTGAGGCTTACGATCATTTGCAGTATTCTGGTAATGATGTAGTTGATAGGAGGGCTTTACTTAGAGTTAATTCGGAAATGGGTACTGATTATATGGAAGATCGTAGGGCGTTGATGAGAATTAATTCTGAAGTGGGTTCAGTTACGAATAGTGATATAAGGCCTTTTAGGCAGATAAGTGTATCGGTTGTGAATAATAACCATGGAGTTGGTGAGTTTGTGGAGAAAGAGAAGAGGACGCCGAAAGCTAATCAGTATTATCGGAATTCTGATTTTCTTCTTGGGAAAGATAGATTACCCCCTGAAACGAACAAGAGGCGTAAATCTAACAGTGGAAGAAAACATAGCAAGGAGTTGGATTATGTAAGGAATCAGATGTTTAAGAACTGTAACAATTTGCTGCAGAGGTTAATGAAGCACAAACATGGTTGGGTGTTTAACGAGCCCGTTAATGCTAAACAGTTGGGACTTCATGATTACCATGACATTATTAAACATCCGATGGATTTGGGCACGATCAAGAGTCGTCTTGCACAGAACTTCTACAAGTCTCCCATGGAGTTTGCAGAGGATGTTAGACTCACATTTCGTAACGCCATGACGTACAATCCAAAAGGGCAAGATGTACATGTTATGGCTGAGCAGTTATCCAATATTTTTGAAGAAAGGTGGGCTGTGATTGAATCAGAAGCTAATCAAGATTTTAGATATGGAATGATTTATGACGCGAACACTCCAACTCCCACTTCAAGAAAGGTTCCTCATTTTGCACATGCTCCTTCAAGAATGCTGTATAGGTCAGAATCAATGAACTTGCCTGTGATGAATATGCAAAAACCCTCAAAGATTATGCCGACAGTGAGGACACCTGTACCGAAGAAACCTAAAGCCAAGGACCCTAACAAGAGGAACATGACTTATGAAGAGAAGCAGAAGCTTAGTACAAATCTTCAGAGTTTACCTTCTGAAAAGCTTGACAGCATTGTCCAGATAATCAAGAAGAACACCTCACTTTCTCAACATGATGATGAGATTGAAGTTGATATTGATAGTGTTGATATAGAAACACTTTGGGAACTTGATAGGTTTGTCACGAATTACAAAAAGAATTTGAGCAAGCACAAAAGGAAAGCTGCACTTGCTCAACAAGCAAGGGCAGAAGCTGGTGTTATTAATCATGCAGTGAATCCATCAACATCCATTCCGGAGACCCCCAAAGAAAACAAAACAAATGAAAAGGCTCTTGCTAGTACACCGCATAATCAAGGAGGGGGAGCAGTTAATGCCAATAGCTCAAGCAGTTCTAGCAGTGATTCTGGATCCTCTTCAAGTGATTCAGATAGTGATAGTTCATCTGAAGATGGATCAGATGCAGGTCATTCACCTAGAAGTTGA | 1932 | 43.79 | MDSGVLDAVRISKGRSKWGEGSKVYTRRVKTTTTNTTNTTTTAITATVAAAASASSPTPTATVTAASPTTTPNNGQTLATELANYEIRSTLSPVVEAFDDHSVREAPGNGVVKPVVVVVDGRVRINVRAAKAAKNEVIELMETMKAELERVRRVAQRLEDKEAELTAFSTVDGVAGDGDGEAYDHLQYSGNDVVDRRALLRVNSEMGTDYMEDRRALMRINSEVGSVTNSDIRPFRQISVSVVNNNHGVGEFVEKEKRTPKANQYYRNSDFLLGKDRLPPETNKRRKSNSGRKHSKELDYVRNQMFKNCNNLLQRLMKHKHGWVFNEPVNAKQLGLHDYHDIIKHPMDLGTIKSRLAQNFYKSPMEFAEDVRLTFRNAMTYNPKGQDVHVMAEQLSNIFEERWAVIESEANQDFRYGMIYDANTPTPTSRKVPHFAHAPSRMLYRSESMNLPVMNMQKPSKIMPTVRTPVPKKPKAKDPNKRNMTYEEKQKLSTNLQSLPSEKLDSIVQIIKKNTSLSQHDDEIEVDIDSVDIETLWELDRFVTNYKKNLSKHKRKAALAQQARAEAGVINHAVNPSTSIPETPKENKTNEKALASTPHNQGGGAVNANSSSSSSSDSGSSSSDSDSDSSSEDGSDAGHSPRS | 643 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fli1g00321 | 643 | Gene3D | - | 271 | 415 | IPR036427 | GO:0005515(InterPro) | |
| Fli1g00321 | 643 | MobiDBLite | consensus disorder prediction | 273 | 297 | - | - | |
| Fli1g00321 | 643 | Pfam | Bromodomain | 309 | 393 | IPR001487 | GO:0005515(InterPro) | |
| Fli1g00321 | 643 | SMART | bromo-6 | 302 | 408 | IPR001487 | GO:0005515(InterPro) | |
| Fli1g00321 | 643 | MobiDBLite | consensus disorder prediction | 569 | 643 | - | - | |
| Fli1g00321 | 643 | MobiDBLite | consensus disorder prediction | 572 | 628 | - | - | |
| Fli1g00321 | 643 | PANTHER | OSJNBA0053K19.4 PROTEIN | 23 | 635 | - | - | |
| Fli1g00321 | 643 | CDD | Bromo-plant1 | 305 | 403 | IPR037377 | - | |
| Fli1g00321 | 643 | Pfam | Bromodomain extra-terminal - transcription regulation | 484 | 544 | IPR027353 | - | |
| Fli1g00321 | 643 | Coils | Coil | 543 | 563 | - | - | |
| Fli1g00321 | 643 | PRINTS | Bromodomain signature | 370 | 389 | IPR001487 | GO:0005515(InterPro) | |
| Fli1g00321 | 643 | PRINTS | Bromodomain signature | 336 | 352 | IPR001487 | GO:0005515(InterPro) | |
| Fli1g00321 | 643 | PRINTS | Bromodomain signature | 320 | 333 | IPR001487 | GO:0005515(InterPro) | |
| Fli1g00321 | 643 | PRINTS | Bromodomain signature | 352 | 370 | IPR001487 | GO:0005515(InterPro) | |
| Fli1g00321 | 643 | SUPERFAMILY | Bromodomain | 286 | 411 | IPR036427 | GO:0005515(InterPro) | |
| Fli1g00321 | 643 | Coils | Coil | 127 | 164 | - | - | |
| Fli1g00321 | 643 | ProSiteProfiles | NET domain profile. | 474 | 554 | IPR027353 | - | |
| Fli1g00321 | 643 | Gene3D | - | 477 | 556 | IPR038336 | - | |
| Fli1g00321 | 643 | ProSiteProfiles | Bromodomain profile. | 317 | 389 | IPR001487 | GO:0005515(InterPro) | |
| Fli1g00321 | 643 | MobiDBLite | consensus disorder prediction | 277 | 297 | - | - | |
| Fli1g00321 | 643 | MobiDBLite | consensus disorder prediction | 54 | 74 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fli1g00321 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 88346 | Fli1g00321 | Fli4g01408 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fli | Fli-Chr1:6593599 | Fli4g01134 | Fli-Chr4:76049380 | dispersed | |
| Fli | Fli-Chr9:10812543 | Fli1g00321 | Fli-Chr1:6593599 | transposed | |
| Fli | Fli-Chr1:6593599 | Fli14g01673 | Fli-Chr14:54862820 | wgd | |
| Fli | Fli-Chr1:6593599 | Fli4g01408 | Fli-Chr4:83209059 | wgd |