AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli1g00347 ATGGATATCATCACATCACCACCACTACCACCACCACCACACCACGACGGCGACCACCCATCTCCGGCGACCTCCACCACTACCACCACCCAAACGCCACCACTTTCTCCAAGACCCGTTTCACTACCCGATCCAAACCCAAACCCATACCCAACAACCTTCGTTCAAGCCGACACCACCTCCTTCAAACAAGTAGTCCAGATGCTCACCGGATCATCCAAACCGACCCACCACCCAGATCCGACTCCGGCCAAGGGATCCATCCCGCCGGTCAAAACCGGTCAACAGAAGAAATTCAAGCTCTACGAGCGTCGAAACACCCTCAAAAACGGCCTGATGATCAACCCATCGGGTTCGAGATTCGGGTCTCCGGCGAGAGTACCCGAATTGCTCTCACCGAGTGTTCTTGATTTTCCGGCGTTGGTGTTAAGTCCGGTGACGCCGTTGACGGAGGATCCGTTTAATAAGTCGTCGGAGGAGGAGAGGGTGATTAAGGAAAAAGGGTTTTACTTACATCCGTCGCCTAGGGCGGCGACGCCGCGTGCGGCGGCGGAGCCACGGTTGTTGCCGCTGTTTCCGGTGACGTCGCCTCGGGTGTCGGAGTCGTCTATTTAG 615 56.42 MDIITSPPLPPPPHHDGDHPSPATSTTTTTQTPPLSPRPVSLPDPNPNPYPTTFVQADTTSFKQVVQMLTGSSKPTHHPDPTPAKGSIPPVKTGQQKKFKLYERRNTLKNGLMINPSGSRFGSPARVPELLSPSVLDFPALVLSPVTPLTEDPFNKSSEEERVIKEKGFYLHPSPRAATPRAAAEPRLLPLFPVTSPRVSESSI 204
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli1g00347 204 MobiDBLite consensus disorder prediction 51 77 - -
Fli1g00347 204 Pfam VQ motif 49 74 IPR008889 -
Fli1g00347 204 MobiDBLite consensus disorder prediction 1 96 - -
Fli1g00347 204 MobiDBLite consensus disorder prediction 20 35 - -
Fli1g00347 204 MobiDBLite consensus disorder prediction 1 18 - -
Fli1g00347 204 MobiDBLite consensus disorder prediction 36 50 - -
Fli1g00347 204 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 29 200 IPR039611 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli1g00347 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
88350 Fli1g00347 Fli4g01434
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr1:6976408 Fli8g00911 Fli-Chr8:22955463 dispersed
Fli Fli-Chr1:6976408 Fli4g01434 Fli-Chr4:83854699 wgd