AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli1g00353 ATGACTGGAGTGTCATTGGATTTAAGACCACAGAGTTATGGATCACCACAACAGGCACAAAACGGTTCGTTGCAGACTCAAAATGGGTTCACTGCACGCAAGACTTCGAGGATGTCCCTCTCTGGTTCAAGGGAGAAAGATAAATTACTTCCTTTTTTGTGTAGATATCTAAGTAGAAAGAAGATTGTAATGATGGTTTTAGCTACATTTGCACTCATGGCTTTCCTATCAGGGTTCTTTACGGCCAGTAGAGAAGATGCATCAGAGAGCACGATCTTCAATCATTTTAGTGATGCATATAATACCTCTTTTCAGTTCTCCAGAACGTTTCGTGGTCAGAAAGATGATAATTCTAATATACAAGGAACTCTGTCGGTATGTGAAGAAAACCCTCCTACCCGGCATACTTTCAGTGCATCACATTCCACAGGATCTGTCCCTTCTCATAGCAATTTTTGTCAAAATTTTGCATTTCCACCCCCTCCTCCAGGTGATAGGAGGCGGCCTGGACCTAGACCGTGTCCTGTCTGTTACCTTCCAGTGGAGGAAGCTATGGCTAGCATGCCGAGTGCCACGTCAGGATCACCTGTTCTTCAACACTTAACTTATTTTCATGAGGAGACTTCTACTAAAACTGAGCCACATGAAGGCTCGGATTTTGGTGGATATCCTTCCATAAAGCAAAGGAATGAATCTTTTGATATTAAGGAATCAATGACTGTACATTGTGGGTTTGTAAAAGGTTGCAGACCTGGTTACAAAACTGGATTCGATATCGATGTATCTGATCTTGTGGAGTTGGAGCAATTTCATGATGTTATTGTTGCATCAGCCATATTTGGAAACTATGATGTAATTCAGCAGCCAACTAAGATTAGTGAGGCTGCAAGTAAAAACATTCCATTTTATATGTTTATTGATGAAGAAACTGAAGCATATATGAGAAATTCTAGCGCTTTGGACTATAGAATGAAGGTTGGATTATGGAGAATTATTGTTGTGCATAATGTTCCTTACACGGATTCTAGACGAAATGGAAAGGTCCCGAAGCTTTTACTACACAGACTCTTTCCAAATGTTCGGTATTCCATATGGATTGACGGAAAACTGCAACTTGTTGTGGACCCATATCAACTTCTCGAAAGGTTTTTGTGGCGCCACAATGCTACTTTTGCTATTTCAAAACATTATAGGCGGTTTGATGTGTTTGAAGAAGCTGAAGCTAATAAAGCTGCAGGGAAATATGACAATGCATCCATTGATTACCAGATTAACTTTTACAAAAATGAGGGTCTAACACCTTATTCTGAGGCTAAGCTTCCTATAATCAGTGATGTTCCAGAAGGGTGTGTCATCATAAGAGAACATATTCCAATAACGAATCTCTTCACGTGTTTGTGGTTCAATGAAGTTGACCGGTTTACCTCAAGAGATCAGTTAAGTTTTGCTACTGTAAGAGACAAAATCATGGCTCAAGTCAACTGGAGTATTAATATGTTTATGGATTGTGAAAGAAGGAATTTTGTGATACAGGCATACCATAGAGATCTACTAGAGCACATGCCACCACCTGCTGCTAAAATAAGTAGTTCAAGACGGGCACGAGTTAATGTTCCTGTTACAGTTCCTATACCTGTGAGAGGTAATAATTCATCTGCCAAAAGTTCGGTAAAGAAAAACGCTGTTAAACGGGGGAAAGGAGAGAGGAGATCTCGTTCCAGAAGGCGTTCGAGAAATCCCAGTAATAGGGACAACACGTTCATTTGA 1767 40.29 MTGVSLDLRPQSYGSPQQAQNGSLQTQNGFTARKTSRMSLSGSREKDKLLPFLCRYLSRKKIVMMVLATFALMAFLSGFFTASREDASESTIFNHFSDAYNTSFQFSRTFRGQKDDNSNIQGTLSVCEENPPTRHTFSASHSTGSVPSHSNFCQNFAFPPPPPGDRRRPGPRPCPVCYLPVEEAMASMPSATSGSPVLQHLTYFHEETSTKTEPHEGSDFGGYPSIKQRNESFDIKESMTVHCGFVKGCRPGYKTGFDIDVSDLVELEQFHDVIVASAIFGNYDVIQQPTKISEAASKNIPFYMFIDEETEAYMRNSSALDYRMKVGLWRIIVVHNVPYTDSRRNGKVPKLLLHRLFPNVRYSIWIDGKLQLVVDPYQLLERFLWRHNATFAISKHYRRFDVFEEAEANKAAGKYDNASIDYQINFYKNEGLTPYSEAKLPIISDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFATVRDKIMAQVNWSINMFMDCERRNFVIQAYHRDLLEHMPPPAAKISSSRRARVNVPVTVPIPVRGNNSSAKSSVKKNAVKRGKGERRSRSRRRSRNPSNRDNTFI 588
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli1g00353 588 MobiDBLite consensus disorder prediction 1 42 - -
Fli1g00353 588 MobiDBLite consensus disorder prediction 544 558 - -
Fli1g00353 588 PANTHER ALKALINE CERAMIDASE-RELATED 35 552 IPR006852 -
Fli1g00353 588 MobiDBLite consensus disorder prediction 1 38 - -
Fli1g00353 588 MobiDBLite consensus disorder prediction 559 577 - -
Fli1g00353 588 Pfam TOD1-MUCI70, glycosyltransferase-like domain 201 514 IPR048354 -
Fli1g00353 588 MobiDBLite consensus disorder prediction 541 588 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli1g00353 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr1:7190719 Fli9g00699 Fli-Chr9:26412129 dispersed
Fli Fli-Chr1:7190719 Fli8g00916 Fli-Chr8:23067509 transposed