Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fli1g00371 | ATGGAGTGCATCAGGAACACTCTCGATAGACGCATCCAGTTCTACGAGGATGAGATTCGTACGCTCAATGAACAACGTTTGATGCCTACATGGAGCTTTTGTACCTTTTTCATCCTCAAAGAAAGCTTGGCATTCATGTTAGAGATGGCTAATCTTCACGAGGATTCACTGCGCGAATACGATGAACTAAAGCTATGTTACTTGGAAACAGTTAAAAGTGCAGACACACAAAGGGAATTTGGAGGCAAGGAGCAGGGAGATGATCAATCTGCGATACTAAACCGTAACAACAAACAACTGACACAGATTGTTCTAGAAACTTCCTTTCGAGAGTTCGAGTTTCAGCAATACCTATTTGCCTGTCAAGCTAAGCTGTTGTTTAGTCTAAACCGTCCATATGACGTTGTGTCAAGAGGGTTCTCGTTTATAATTAGTTTCTCAGAAGCATTGGCCCTGCATGAGAGTAATTTGCCCTTTTGTATGAGGGAACTTTGGATCCTAACCTCATGTTTGAGCCTGCTCAATGCAACTGCTGACCATTATAGAGACGGACAAGTGGGACCGGATGTAGAAAGAGATTATTATCGTCTACGGGGTGAATTATATTCTCTATCTCGAGTTAAGTTCATGAGGCTTGCATATTTAATTGGATATGGATCTAATATAGAAAGAAGTCCACTCAACAGTGCTTCACTTAGCATGTTACCTTGTCCTAAGCCAGCAGTTAGGCCTTCAGTTCCCTCTGATGCCTCATCTGAGGGTCTTGTCAAAGAAAAGATAATTCTTCAAGTTACTCCAAGAATCAAGCACTTTGGTATTCAGAGGAAACCGCTGCCTCTTGAACCTCCTCCTGTTCAGTTTGACTCTTATCATCTAAGCCCGTTTCAAGGGTCTGATGGTTCAGATGCAGAACCGCAAACATCAGTTTCAAGGACAGATTCTACAGCAGCAAGCACTGAGAGCTCAGTTGATACCACGAGACTAGCAGAAGTTTTTGTGGCTGCTGAACATGCCCTTCGTGCAACTATTTCTGATCCAGATTTATGGAAATCTTTATCATCTTTAGATGAATTCGAGAAAAAGAATCTTGAGCTATCAAAGGGTGCTGCTGATAGTTATTATCATGCATGGTGGAAGAGGCATGGAGTTGTTTTTGATGGTGAAATTGCATCTGTTTATTTCAAACACAAGAATTATGATCAAGCTGCAAATTCGTACGAAAAAGTTTGCGCGCTTTATTCTAGTGAAGGATGGCAAGATTTGTTAGCAGATGTGCTTCCTAACTTAGCCGAATGCCAGAAAATACTTAATGATAAGCCTGGTTACTTAACATCATGTGTTAGATTACTTTCTTTGGATAAAAACTTGTTCTTGAACAAAGAACGGCAGGCGTTTCAGTCAGAACTAGTTCGTCTTGCACACAGTGAAATGGCTGACCCGGTCCCTTTAGATGTGTCAACACTGATAACCTATTCGGGTCATTCAGGCCCACCTATGGAGCTTTGTGACGGTGACTCAGGCACTTTGTCTATAACTTTGTGGAGTGAGTTTCCTGATGATATCACTCTTGAATCACTTAGTCTCACCTTGACAGCTACACACAATGCTGATGAACGCGTTAAGGCAATCAGGAGCAGTGGTGTTAATATATTGAACGCGGGTCAAAATACGATTGCTCTTTCATTGCCCCCACAAAAACCGGGCTCCTATGTGTTGGGTGTTCTTACAGGGCAGATTGGTCATTTAAGATTCAGATCTCATGGATTCTCCAGAGGTAGGCCAGGAGACAGTGATGATATGAGCTTTGATAAGCCAACTAAGCCTATTTTGAAGGTATTCAAACCAAGGTCCCTTGTGGATCTATCTGCAGCAGTTTCATCTGCATTACTAATGAACAAGCCTCAGTGGGTCGGGATAGTTATAAAGCCATTAGAATACTCCCTCAAGGGTGCTCGTTTACACATTGACGCTGGGCCTGGACTAAAGATCGAGGAGTCACGCGCCATTGAAATTGAGAAACACGTCGATAAAGATAATAATAGTTCTAATGCTTCTGATATTCCTACAAAATCTTCTCAAATGAATCTTACAAATGGTAGTATAGAGTTACCAGATTGGGCCAGCAATATAACTAGCATTTTATGGGTTCCAGTGTGTGCCATTAGTGATGGGCTACCAAGAGGAACATCTGCAGGAGTATTATCGACCCCGAGACCAAGCATTGCTAACGGGCTGAGGACTTTAGCCCTCAAACTCGAATTTGGGGCGTCACATAATCAGATACTGAAAAGGACTGTGCCGGTTCATTTCACTGACCCGTTCCACATCAGCACGCGGGTCACAGACCAGGGGAGTGATGGTTCATTGTTTTTGCAGGTGATATTGCAGTCACAGGTGAAGGCCTCATTAACTATACATGATGTTTGGTTAGATCTGCAGGATGGGTTTTCTCATGCTGGACGAGGTGACGGGAGACCGACATCTGGCATGTTCCCATTGGTTGTTCCCCCAACATCTAAATCTGGAATTTTGTTTGGTATTTCACTTGGAAATACCACTGAAGATGAAGGGAAAGCGGATCATTGCGATACAATAATAAATATAAAATACGAAATTTGCGGGGATAGAAATGTTGGATCCCATACCCCTCTCTCTCTCAAAACCGAAGGACCCGAACATGATGACGACACATCGTTTTTAACGTTCAAGGCCGGTCTTGTCTTACAACGGCCAGTACAGGAACCGTCATTGGCGGTTGCTTTTCTTCCTCTACCTTCAAACGGTCTTACAGTTGGTCAACTAGTCACATTCAAGTGGAGACTCGAAAGGTTGACCAACTTTGACTCCAAAGACGAATTATTATACGAAGTCAACGCCAATTCTAGGAACTGGATGATTGCTGGAAGAAAAAGAGGCCATGCCCCTCTCTCCTCCAAACAAGGAGCAAGAATTGAGATATCAATAATGTGTGTGCCACTAGCAGCAGGACATGTACGACCTCCACAACTCAACTTGCCCGATGTCAATCGAGCCAATATATGTTGTAATCCTGCGGGGCCGCATTTAGTGTGCGTGCTACCTCCACCTTTGAGCTCGTCATTTTGCATTCCCGCGTGA | 3117 | 43.31 | MECIRNTLDRRIQFYEDEIRTLNEQRLMPTWSFCTFFILKESLAFMLEMANLHEDSLREYDELKLCYLETVKSADTQREFGGKEQGDDQSAILNRNNKQLTQIVLETSFREFEFQQYLFACQAKLLFSLNRPYDVVSRGFSFIISFSEALALHESNLPFCMRELWILTSCLSLLNATADHYRDGQVGPDVERDYYRLRGELYSLSRVKFMRLAYLIGYGSNIERSPLNSASLSMLPCPKPAVRPSVPSDASSEGLVKEKIILQVTPRIKHFGIQRKPLPLEPPPVQFDSYHLSPFQGSDGSDAEPQTSVSRTDSTAASTESSVDTTRLAEVFVAAEHALRATISDPDLWKSLSSLDEFEKKNLELSKGAADSYYHAWWKRHGVVFDGEIASVYFKHKNYDQAANSYEKVCALYSSEGWQDLLADVLPNLAECQKILNDKPGYLTSCVRLLSLDKNLFLNKERQAFQSELVRLAHSEMADPVPLDVSTLITYSGHSGPPMELCDGDSGTLSITLWSEFPDDITLESLSLTLTATHNADERVKAIRSSGVNILNAGQNTIALSLPPQKPGSYVLGVLTGQIGHLRFRSHGFSRGRPGDSDDMSFDKPTKPILKVFKPRSLVDLSAAVSSALLMNKPQWVGIVIKPLEYSLKGARLHIDAGPGLKIEESRAIEIEKHVDKDNNSSNASDIPTKSSQMNLTNGSIELPDWASNITSILWVPVCAISDGLPRGTSAGVLSTPRPSIANGLRTLALKLEFGASHNQILKRTVPVHFTDPFHISTRVTDQGSDGSLFLQVILQSQVKASLTIHDVWLDLQDGFSHAGRGDGRPTSGMFPLVVPPTSKSGILFGISLGNTTEDEGKADHCDTIINIKYEICGDRNVGSHTPLSLKTEGPEHDDDTSFLTFKAGLVLQRPVQEPSLAVAFLPLPSNGLTVGQLVTFKWRLERLTNFDSKDELLYEVNANSRNWMIAGRKRGHAPLSSKQGARIEISIMCVPLAAGHVRPPQLNLPDVNRANICCNPAGPHLVCVLPPPLSSSFCIPA | 1038 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fli1g00371 | 1038 | Pfam | Trafficking protein particle complex subunit 10, TRAPPC10 | 936 | 1005 | IPR022233 | - | |
| Fli1g00371 | 1038 | MobiDBLite | consensus disorder prediction | 673 | 693 | - | - | |
| Fli1g00371 | 1038 | SUPERFAMILY | TPR-like | 388 | 439 | IPR011990 | GO:0005515(InterPro) | |
| Fli1g00371 | 1038 | PANTHER | EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1-TMEM1 | 1 | 1037 | IPR045126 | GO:0006891(PANTHER)|GO:0034498(PANTHER)|GO:0048193(InterPro)|GO:1990071(PANTHER)|GO:1990071(InterPro) | |
| Fli1g00371 | 1038 | Pfam | Foie gras liver health family 1 | 386 | 451 | IPR021773 | - | |
| Fli1g00371 | 1038 | Coils | Coil | 5 | 25 | - | - | |
| Fli1g00371 | 1038 | MobiDBLite | consensus disorder prediction | 296 | 322 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fli1g00371 | K20307 | trafficking protein particle complex subunit 10 |