AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli1g00376 ATGACTGCAATCTTATCCTTGGGTACATCCCCAATCAACTTCAAGGTGATTACGAATTCAACGAGAACTGTAGTTCCATTACAGTCAAGCTCTCGAATCGCCATGCCTAATAATCATCAACATCCTGCTTCTTTGTTTGTTCCAGAGGTTGAAAGTGCAGTTGATACCCTGTATCCCGAATTCAGGGCCGTTGATAATCTTGTGGCACGCAATACATCTAGAGTTCTCAAAGCTTTTCAGAATGCTAGGGTTGGATCTCATCACTTTGGTGGTTGCACTGGCTATGGCCATGAAGAAGCCGGGGGGCGAGAAGCCCTTGACCAAGCTTTTGCTGAAATTTTTGGTGCTGAATCTGCAATTGTCCGCTCGCAGTTCTTCTCAGGGACTCATGCTATTGCCTGTGCCCTTTTTGCTTTCTTGAGACCAGGTGATGAGCTTTTGGCTGTTGCTGGTGCTCCTTATGATACACTGGAGGAAGTTATAGGAATCAGGGATGACAATGGCATAGGTTCCTTAAAAGATTTTGGAATCAGTTATCGAGAAGTTGCACTTGCAGATGATGGGGGGGTTGATTGGGATGCTCTTGAGGTTGCTTTAAAACCTCAAACGAAATGTGCTCTTATTCAAAGATCATGTGGGTATTCTTGGCGTAAAAGTTTAAGCGTTAATGAAATTTCTAGAGCAATACACATCATCAAGTCACAAAATCCAAATTGTATGGTTATGGTGGATAATTGCTATGGTGAATTCACAGAAGCCATTGAACCTCCAATGGTGGGTGCAGATCTTGTTGCAGGAAGTTTAATAAAAAATCCAGGTGGAACAATCGCACCATGTGGCGGATACGTTGCAGGGAAAGAAAAATGGGTAAAAGCAGCAGCAGCCCGTCTCTCTGCACCAGGTCTTGGGGTTGATTGTGGGTCAACGCCTGGTGATATCATGAGAACATTTTTTCAAGGATTGTATCTCTCACCTCAAATGGTTGGGGAAGCAATTAAGGGAGGTTTACTTATCGCTGAAGTTATGTCCACCCAAGGTTACAAAGTCCAGCCACTTCCTCGCGTACCTCGTCACGACATAGTACAGGCGGTACAACTTGGAAGCTGTGAGAAGCTTCTTGCTTTCTGTGAGGCTGTACAAAGAAGCTCACCTGTAAGCTCTTATACAAAGCCGATAGCAGGATTGACAGCTGGCTATGCATCCGAGGTGATCTTTGCTGACGGGACATTTATAGATGGCAGCACGAGCGAACTCTCATGTGATGGGCCGTTAAGGGAGCCTTTCTGCGTGTTCTGTCAGGGTGGCACTCATTGGACTCAGTGGGGGCTAGTTCTGGGTGAGGTTTTGAATTCTTTGTAG 1359 45.4 MTAILSLGTSPINFKVITNSTRTVVPLQSSSRIAMPNNHQHPASLFVPEVESAVDTLYPEFRAVDNLVARNTSRVLKAFQNARVGSHHFGGCTGYGHEEAGGREALDQAFAEIFGAESAIVRSQFFSGTHAIACALFAFLRPGDELLAVAGAPYDTLEEVIGIRDDNGIGSLKDFGISYREVALADDGGVDWDALEVALKPQTKCALIQRSCGYSWRKSLSVNEISRAIHIIKSQNPNCMVMVDNCYGEFTEAIEPPMVGADLVAGSLIKNPGGTIAPCGGYVAGKEKWVKAAAARLSAPGLGVDCGSTPGDIMRTFFQGLYLSPQMVGEAIKGGLLIAEVMSTQGYKVQPLPRVPRHDIVQAVQLGSCEKLLAFCEAVQRSSPVSSYTKPIAGLTAGYASEVIFADGTFIDGSTSELSCDGPLREPFCVFCQGGTHWTQWGLVLGEVLNSL 452
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli1g00376 452 Gene3D - 307 452 - -
Fli1g00376 452 Gene3D - 98 306 IPR015421 -
Fli1g00376 452 Gene3D - 46 97 - -
Fli1g00376 452 Pfam Methionine gamma-lyase 51 450 IPR009651 -
Fli1g00376 452 PANTHER CYS OR MET METABOLISM PYRIDOXAL-PHOSPHATE-DEPENDENT ENZYME 20 452 IPR009651 -
Fli1g00376 452 SUPERFAMILY PLP-dependent transferases 74 424 IPR015424 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli1g00376 - -