AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli1g00476 ATGGCACCCCCTTCATCATCATCATCCACCTTCATCTTCAAAACCCACTTCACAATAACCCTGATCATCACCATCCTCCTCACTTGTACCCTCACTCCCAACGTACAAGCCCTCAAAGCACCAATTCGCCCAGAAGACATACTCCCCCTTTTGCCCCGTCAAGTTTCATGGCCTCTGCTCAAAAACCTCCGCGGTGCCGCCGATCTCCTCCCCAGCTTCGTCGGCGCCGCCTCGGTGGCTAATAACTCCGGTTTGCATTGGAAAGGCTCGTGCTTTTATGACAACACTGCGTGGTTAGAGCTGCATAACAAAAGTGGTAGTGAGTTTGGTGGGGGTACTCTTCATGTTAAGGTAAGCAATGCGCACAGTTGGACTTGTATGGATATTTATGTCTTTGCAACACCTTATCGTGTGACATGGGACTACTATTTTTTGTCGCGTGAGCATACACTTGAGTTCGATGAGTGGAGCGGGAAAGCTGAGTACGAATATGTGAAACATAAAGGAGTTTCAATTTTTCTCATGGAAGCAGGAATGATAGGAACCCTAGAAGCATTATGGGAGGTCTTCCCTTTATTCACAAATACAGGGTGGGGGGAGAGTTCTAATCTTGCTTTTCTCAAGAAACATATGGGAGCTACATTTGAAGCACGGCCTGAACCATGGGTAACAAACATAACTCAAGATGATATCCATTCAGGGGACTTCCTTGCAATATCAAAAATTCGTGGTAGGTGGGGCGGGTTTGAGACCCTTGAAAAATGGGTATCCGGGGCATATGCAGGTCATTCTGCTGTTTGCTTGAGGGACCCAGAAGGAAAACTATGGGTTGGTGAATCTGGGCATGAAGATGAAGAGGGCCAGGATGTTATTGCTTTGTTGCCATGGGATGAGTGGTGGGAATTTGAGTTGACTAAGGATGATGCTAATCCACATATTGCTTTGCTTCCTTTGCATCCTGATCTACGGTCTAGATTTAATGAAACTGCTGCTTGGGAGTATGCACAAAGTATGGTTGGGTTGCCATATGGTTATCATAACTTGATATTTAGTTGGATAGATACTGTCAGTGATAACTATCCACCACCTTTGGACGCTAATCTGGTTGCATCTGTTATGACAGTGTGGGATCAAATGCAGCCTGCATATGCAGCTAATATGTGGAATGAAGCCTTGAATAAACGGCTTGGTACTGAGGGACTTGAACTTGCTGATATTTTAGTGGAAGTTGAAAGGCGTGGTTCATCTTTCGCTGAATTACTGACTATACCCGAACAAGATGATTGGGTATACGCTGATGGAAAGTCAACTTCTTGTGTTGCTTTCGTCCTTGAAATGTACAAAGAAGCGGGGCTTTTTGGAGATCTTGCATACCAAATTCAAGTTACTGAGTTTACGATAAAGGATGCTTACACGCTCAACTTCTATGAAAACAATTCGAGCCGCCTGCCAAAGTGGTGTAATGAAGGCGACACGGTTGACCTTCCATTTTGCCAAATTAAAGGAAAATATCGAATGGAATTACCTGGATACAATACCATTGACCCGTACCCACATATGACAGAAAAATGCCCATCACTACCCCCAGATTATTCAAGACCCCAGTACTGCTGA 1614 44.8 MAPPSSSSSTFIFKTHFTITLIITILLTCTLTPNVQALKAPIRPEDILPLLPRQVSWPLLKNLRGAADLLPSFVGAASVANNSGLHWKGSCFYDNTAWLELHNKSGSEFGGGTLHVKVSNAHSWTCMDIYVFATPYRVTWDYYFLSREHTLEFDEWSGKAEYEYVKHKGVSIFLMEAGMIGTLEALWEVFPLFTNTGWGESSNLAFLKKHMGATFEARPEPWVTNITQDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDPEGKLWVGESGHEDEEGQDVIALLPWDEWWEFELTKDDANPHIALLPLHPDLRSRFNETAAWEYAQSMVGLPYGYHNLIFSWIDTVSDNYPPPLDANLVASVMTVWDQMQPAYAANMWNEALNKRLGTEGLELADILVEVERRGSSFAELLTIPEQDDWVYADGKSTSCVAFVLEMYKEAGLFGDLAYQIQVTEFTIKDAYTLNFYENNSSRLPKWCNEGDTVDLPFCQIKGKYRMELPGYNTIDPYPHMTEKCPSLPPDYSRPQYC 537
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli1g00476 537 PANTHER OS01G0793500 PROTEIN 16 537 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli1g00476 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2362075 Fli Fli17g00232 Fli-Chr17:8740530 Fli1g00476 Fli-Chr1:9942661
2364721 Fli Fli1g00476 Fli-Chr1:9942661 Fli8g00082 Fli-Chr8:1691299
2386727 Fli Fli1g00476 Fli-Chr1:9942661 Fli9g00091 Fli-Chr9:1965249