AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli1g00491 ATGGCTGAAGAGAACATACGAAAAGCTGTTGAAACTGCCACTAAGGCAGCAGAAGTTGCATCTTCCGAGGGGAAAGCCTTCTGCATTTCACATGTTGATGTAGGGCCAGATACTGCTGCTATTCGTGAAGCAGTTGTCAAAGTCATGGAGCAGAAGGGAATGGCGGTGATGGTTTTCAGCACCGATGAACAATCAAAAAAGGCATTAGTTTGTGCAGGTGTGCCGGAGAAAAGTGATAAAAGCAACCATCTGAAGGTTTTAGAGTGGCTTAAGGCAGCACTGAAGCCGCTAGAAGGCAAAGGTGGTGGAGGGAAAGGTGGTCTTGCTCAAGGCCAGGGACCTGATATAAAACATGTGGATGAAGCAATTGATGTTGCCAAGTCATTCGCGGCTCTCAAACTTGGCTGA 408 47.3 MAEENIRKAVETATKAAEVASSEGKAFCISHVDVGPDTAAIREAVVKVMEQKGMAVMVFSTDEQSKKALVCAGVPEKSDKSNHLKVLEWLKAALKPLEGKGGGGKGGLAQGQGPDIKHVDEAIDVAKSFAALKLG 135
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli1g00491 135 Gene3D - 19 130 - -
Fli1g00491 135 FunFam Alanine--tRNA ligase 22 130 - -
Fli1g00491 135 Pfam DHHA1 domain 5 129 IPR003156 GO:0003676(InterPro)
Fli1g00491 135 PANTHER ALANYL-TRNA SYNTHETASE 2 131 IPR050058 GO:0002161(PANTHER)|GO:0004813(PANTHER)|GO:0005739(PANTHER)|GO:0006419(PANTHER)|GO:0009507(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli1g00491 - -