AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli1g00512 ATGATGGTGCATCCGGCGATTGAACCTCTGTCGTACCTCATCGGAACTTGGAGAGGTGAAGGCGAAGGTGGTTTCCCCACAATATCATCATTCAATTACGGTGAAGAGCTCAATTTCACTCATCCAGGAAACAAGTTTACATTTGCGAGAGAGAAGCCCGTAATAGCTTATTCTCAGAAGACTTGGAAACTGAATTCTGGAGAGCCCATGCATGCTGAGAGCGGCTACTGGAGGCCGAAACCTGATGGAACTATTGAGGTTGTCATTGCACAGAGCACTGGTCTTGTTGAAGTGCAGAAAGGAACATATGATGCAGAAAAGAAAGTGGTGAAGCTTCAAAGTGAGCTTGTTGGAAATGCTTCAAAGGTTAAAGAGATCACTCGAGTTTTTACTCTGGTTAATGAAGAATTATCTTATGTGGTTGAGATGGCTACTAATCTCAACAGTCTTCAACCACATCTGAAAGCTTCTCTTAAAAAGCTCTAA 486 43.0 MMVHPAIEPLSYLIGTWRGEGEGGFPTISSFNYGEELNFTHPGNKFTFAREKPVIAYSQKTWKLNSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYDAEKKVVKLQSELVGNASKVKEITRVFTLVNEELSYVVEMATNLNSLQPHLKASLKKL 161
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli1g00512 161 SUPERFAMILY Lipocalins 3 160 IPR012674 -
Fli1g00512 161 Gene3D - 2 161 IPR012674 -
Fli1g00512 161 Pfam THAP4-like, heme-binding beta-barrel domain 7 160 IPR014878 -
Fli1g00512 161 CDD lipocalin-heme-bd-THAP4-like 7 160 IPR014878 -
Fli1g00512 161 PANTHER THAP4 PROTEIN 3 161 IPR045165 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli1g00512 K23205 THAP domain-containing protein 4