AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli1g00538 ATGTCGGAGCACAGCACCGTTAGTACGGGCAGCATGCCGGATTTCAACCTACCTGATGAAATTCTATCAGTAATCCCTGCGGATCCGTTCGATCAGCTAGATCTTGCTCGGAAGATCACTTCAATGGCGCTGGCGTCACGCGTTTCGAAGCTGGAGGCGGAGGCGGTGAGGCTGAGGCAGAAGTTGAGTGAGAAGGATCGTGTGGTGATAGAGCTTGAGGAGAAGGTGTCGGAGCTTCAGCAGACGTGTCATAGTGTTCAGATGCGGTTGCAGATTGCGGTTGAGGATAATAGGAAGGTTGTGGAGGAGAGAGATGCGTTGGCCGTGGCTGCTAAGAAATTAGGGCGCGATTTAGCTAAGCTTGAGGCATTCAAGCGGCAACTAATGCAGTCATTGAACGAAAACGATTCAAATCTTCATCCGGCAGCAACTGTAGACTTAGGCACCTATGACCAATCTGCTCCCAAAGCTTATCCGGTGAAAGAAGAGGAGACAAATGGCTATAGAAGGCACCATTCTTATAGTGGTTCTATTGATAGTGGAAACATACATGATGACGTCTCGAAGCTTGCCAGTCAAAGGTTTTCTCTGACCCCTTATATCAGCACACGTGTAACTCCATCTGCAACCCCCAAAACAATCTCTGCAAGTGTGTCTCCTAGAAGGTATTCTGCTTCTGGTGCTACATCCCCAACAAAATATAAATCTGATGGTCGTACTTCAATGTCGTCATGGTATCCCTCAAGTCAGCAATCTTCCGCTGGAAACTCTCCTCCTCGTGGGCCCCCAATACCAGGCCGTGCTACTAAGATTGATGGAAAGGAGGTCTTCCGTCAAGCAAGGAGTCGACTATCTTATGAGCAGTTCAGTGCTTTTTTAGCAAATATAAAGGAGTTAAATGCTCAGAAGCAATCTCGTGAGGAGACTTTGAGGAAGGCGGAAGAAATATTCGGGTCTGATAACAAGGATCTTTATCTATCATTTCAAGCTCTACTAACTCGCAACAAACAATGA 1014 47.14 MSEHSTVSTGSMPDFNLPDEILSVIPADPFDQLDLARKITSMALASRVSKLEAEAVRLRQKLSEKDRVVIELEEKVSELQQTCHSVQMRLQIAVEDNRKVVEERDALAVAAKKLGRDLAKLEAFKRQLMQSLNENDSNLHPAATVDLGTYDQSAPKAYPVKEEETNGYRRHHSYSGSIDSGNIHDDVSKLASQRFSLTPYISTRVTPSATPKTISASVSPRRYSASGATSPTKYKSDGRTSMSSWYPSSQQSSAGNSPPRGPPIPGRATKIDGKEVFRQARSRLSYEQFSAFLANIKELNAQKQSREETLRKAEEIFGSDNKDLYLSFQALLTRNKQ 337
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli1g00538 337 MobiDBLite consensus disorder prediction 162 182 - -
Fli1g00538 337 MobiDBLite consensus disorder prediction 206 272 - -
Fli1g00538 337 MobiDBLite consensus disorder prediction 206 257 - -
Fli1g00538 337 PANTHER OS03G0659800 PROTEIN 14 335 - -
Fli1g00538 337 Coils Coil 41 89 - -
Fli1g00538 337 Coils Coil 296 316 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli1g00538 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr11:27291843 Fli1g00538 Fli-Chr1:11010367 dispersed
Fli Fli-Chr14:9761476 Fli1g00538 Fli-Chr1:11010367 dispersed