AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli1g00636 ATGGAAGAATCCCAAGAGATCTTATTGAACTCACTGGCAAAAGCTGGAGTTTCGATCCCACTGGAAGTTTCATCAGTTGAAGATCTAACACCGGAAGCGTTAGTATCAATCTGTGCTCATTCAATTCGTGTAATTTCAAACTCCGACGATTCAATTCCGATCACTTTGCCGGAATCTATGGCTGATCGTTTCAAAGTATGCACCGATCTCGCCTCATCCGTCAAAGACCTAGGTTACATCGGCGACATGAGCTTTCATAAGTTCTTGTATCCATCTGAAGAGGACATGTATAAGTTGATAAGATTTTTGGTTGGGAGGCTCTCTGAATCGTCTCGAACTGTTTTATCACCGGAAACAAAGGATAATAATGCCACTGCAACGATAAATATCGAGGATATGGAAAGGTCTGTCGAGGATACTGATGATGAGGGTCATGATTTGCATGCTAAATTTGAAGACCTGAAACTGAGAACTGGTGATGTGGCATCACATCCACTTCAGTATGCGGAAGATGGTGTGACGGATAATGGTGATGGAAGAGCGAATTCAGAAACTAATAATGTCCGATTAACTGGTATGGAAAATGGCAGAGGTGTAACAGATGATACTCAGGAAGATGGTCAACATAAGTTTGAGCAATCGTCGGTATCTCTTCAATACAAATCATCCCAGACAAATGAGAAGACAGAAATTTTAACAAATCAAGAAAATGTGTTATCGACTGAAATGAAGACAAAATCATTGATGTTACAACAATTGGAAGAGCAACATGATTTGTTGAAAGCAGCAGTGGAAATGGCTTGTGATGAACAAACCCCTTTGGAGTCCTACATTACACAGCTCAGCAAGCAAATAGATGCAAAGAGGCATAATCTAGCAGAAATGGAGTCAAAATGGAAAGCCATCATAAAGCCTTTACAAGAAAAGAAAATAAATTATGAAGAAGCGTTATGTGCAAAACAACCAGAGTCACAAGAAAAACATCGACAGTGGAAAAAACTTGAGCAGGACTTGGAGTCTACATTGTCTGAAACAAAGCAAAGAGAAAAGGAACTTTCCAATTTGTCAGCAGAAATCGAGAAACTGCCCAAGTTGGCAACTAGAAAATCCTACATTGAGCGGATAAAAGAAATTACTAAAAACAGCCGAAAACAAGACATTGACATAGAACGTATTTTAAAAGATACCCGAGATCTTCAATTGGAGAGCAACATGATTCAAGAACGCCTGCATCGAACTTACGCCGTGGTAGATGAAACACTTCTAAGGGAAGCAAAAAAGGACCAAGTAGGAGAGCAAGCTCACGTTTTACTGACAAACATCCATGAGAGTTTTGAAGAAATTGCAGGAAAAATCCTCGCAACTGACAGAACGCGTAGAGAAGAAACAGATCTTGAAACTAAGCTTTCAAGTATTGCTACCCGAAGTTTAAACATGGACAAACTACAAGCGGATCTTGATGCGATCAGGAAAGAAAACGAATACCTTGAATCTCATTTGGGTAATTCTAAGGGCAGCCCGTTTGGTTCACAGAATCCGTTGAGTTGA 1548 39.99 MEESQEILLNSLAKAGVSIPLEVSSVEDLTPEALVSICAHSIRVISNSDDSIPITLPESMADRFKVCTDLASSVKDLGYIGDMSFHKFLYPSEEDMYKLIRFLVGRLSESSRTVLSPETKDNNATATINIEDMERSVEDTDDEGHDLHAKFEDLKLRTGDVASHPLQYAEDGVTDNGDGRANSETNNVRLTGMENGRGVTDDTQEDGQHKFEQSSVSLQYKSSQTNEKTEILTNQENVLSTEMKTKSLMLQQLEEQHDLLKAAVEMACDEQTPLESYITQLSKQIDAKRHNLAEMESKWKAIIKPLQEKKINYEEALCAKQPESQEKHRQWKKLEQDLESTLSETKQREKELSNLSAEIEKLPKLATRKSYIERIKEITKNSRKQDIDIERILKDTRDLQLESNMIQERLHRTYAVVDETLLREAKKDQVGEQAHVLLTNIHESFEEIAGKILATDRTRREETDLETKLSSIATRSLNMDKLQADLDAIRKENEYLESHLGNSKGSPFGSQNPLS 515
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli1g00636 515 PANTHER JM1 PROTEIN 200 501 IPR008530 GO:0097602(PANTHER)|GO:2000060(PANTHER)
Fli1g00636 515 Pfam CCDC22 protein N-terminal domain 1 108 IPR048349 -
Fli1g00636 515 Coils Coil 123 143 - -
Fli1g00636 515 Coils Coil 479 499 - -
Fli1g00636 515 MobiDBLite consensus disorder prediction 178 193 - -
Fli1g00636 515 Coils Coil 278 298 - -
Fli1g00636 515 Pfam CCDC22 protein coiled-coil region 123 474 IPR048348 -
Fli1g00636 515 Coils Coil 243 270 - -
Fli1g00636 515 Coils Coil 335 355 - -
Fli1g00636 515 MobiDBLite consensus disorder prediction 169 195 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli1g00636 K23343 coiled-coil domain-containing protein 22