AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli1g00639 ATGACCACCGGCGGCGGCGACGACGGCGTCACTAGGGTTCCGATCCCGACCACCGTTCGCAAGCTGATTCAAGACCTCACGAAGACTCTCAAATATAAGCACACCGATGACTTCATCTACACAACGCTCAACGACTCCGGTATGGACCCTACCGAAGCCGCCCGGAGGTTGAAGATGATTCACGACATCAGAGAGATAGCCGGAAAGCACAGCGTGGAGGATGTGTATACAATGCTCAAGGAGTGCAATCTCGATGCTAATGAAGCTGCTCAGAGGCTGTTGTACATTGATACTTTCCATGTTGTGAAAAAGAAACATGACCGGAGAAAGACTATAAGCAGTGATGCCTCTCAAGAGAATAAACAGACACGGGGTAATCAATGGAGGGGAGATAAGGGTGGGCGAGGGACTTTCTACTTATCAAAAGTTTTTGAAGATGTTGGAGGAGAGAGAAATTTGAGTTCAGCGAAGGAATATGGTGTTACTAATCGTTCAGAGAGGGTTTTGAGGCCTACCTTGGCAGGTCACATGGGAAAAGAAAACAACGTAGTACATGTGTCCAATTCTTGTGCCAATGTTAATGGTATACAGGCTATATCCAACAGGAGTTACAATCATAAGCTTGCATCAGAACTATCTGCAGATGTTGCATCCTCTGCTTCAGATCATGTTGTGGTTTCATCTCAGAACACCAAGCACGTGTGTGCGATTGGTACGATAAAATGTGAGATTGTAAAACGTAGTGATTCTAATGAATCAAATGCAAGAATTCCAACTGGCAAGAAGTTTAGTGCTGATCAGTTAGGCACTGTAACCATTCCAGTCGTTTCAGAAGCTGCAGATTCTCTCCTAAAATTCAATGTTGCTGAAAAGAATCAGATCTCAGAGATTTTGCAGCCTCTTTCCTTGTCAACCCAAAACAGTACTCAGGTCGTCAGTCCTATTCAGGATAATCAGCTGCCTTCTGAATCTTTAAAAGAGCCTCTAGAAGTGAATGCCTCTGAGCACAAAGATTCAGCTCCTGAAGAACGTGAATTGAATATATCATCTCCAAAACATGATGTGCTGATAGAGAAATCGACTTTATCTTCTCACCAAGCTGTAATTTTCCCTGATCATCTACAAGTCCCTGATAATTATAAATGCCAGTTAGTATTTGGAAGTTTGGATGCAGTCCCTGAGGATTGCGTACCTAAATCCGTGACTGATACTCAGCAAAATGAAGCTCTAAAAGAACCTTCTTTGAGCAACGGAAATGTTTCTGTAATGGTTCAGGAAGGTGAAATTCAAGATCATGTTTCTGAAAAGGTATTGCCTTCAGATGATAACATATCATCCGATTCTTCTGCTCTAAAACGCGAGCAGACAACGGTGGAGATAGTCCCCCTCCCTCTTCAACAGGATTTCAGAATCTTCCAGTTCTTCAAACTACCAGGGACTACAGCTATGGTTATTTGCCACCTCTGGTGGGCCCACATTTTGTACAAGTTGATATACCTGAACTACAGAATGGGAACTCTCAAGCTGTATCTGCAGTGGGCCAACCTCCTTTGA 1554 43.63 MTTGGGDDGVTRVPIPTTVRKLIQDLTKTLKYKHTDDFIYTTLNDSGMDPTEAARRLKMIHDIREIAGKHSVEDVYTMLKECNLDANEAAQRLLYIDTFHVVKKKHDRRKTISSDASQENKQTRGNQWRGDKGGRGTFYLSKVFEDVGGERNLSSAKEYGVTNRSERVLRPTLAGHMGKENNVVHVSNSCANVNGIQAISNRSYNHKLASELSADVASSASDHVVVSSQNTKHVCAIGTIKCEIVKRSDSNESNARIPTGKKFSADQLGTVTIPVVSEAADSLLKFNVAEKNQISEILQPLSLSTQNSTQVVSPIQDNQLPSESLKEPLEVNASEHKDSAPEERELNISSPKHDVLIEKSTLSSHQAVIFPDHLQVPDNYKCQLVFGSLDAVPEDCVPKSVTDTQQNEALKEPSLSNGNVSVMVQEGEIQDHVSEKVLPSDDNISSDSSALKREQTTVEIVPLPLQQDFRIFQFFKLPGTTAMVICHLWWAHILYKLIYLNYRMGTLKLYLQWANLL 517
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli1g00639 517 Pfam GBF-interacting protein 1 N-terminal 58 110 IPR009719 -
Fli1g00639 517 Pfam GBF-interacting protein 1 N-terminal 15 57 IPR009719 -
Fli1g00639 517 PANTHER FLOCCULATION PROTEIN (DUF1296) 2 57 IPR044277 GO:0051082(PANTHER)
Fli1g00639 517 MobiDBLite consensus disorder prediction 107 133 - -
Fli1g00639 517 SUPERFAMILY UBA-like 58 111 IPR009060 GO:0005515(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli1g00639 - -