AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fli1g00670 | ATGGATCACATACTCAACACCACCACCACCACCACCTTCTTCTCCGACGTACCCATCAACCTCGCCACCACCCACCGTCAGGTGGTTCCGATCACATTATTCGTCGCCGTACTCTGCCTCTGTTTAGTTATCGGACACTTGCTCGATGAAAATCGATGGGTTAACGAGTCCATCACCGCCATCATCATCGGTTGTGTTGTTGGAACGATTATCTTATGCGCGAGTAAATGGAAAAGCTCGCAGTTATTGAGATTTGATGAAGAGTTGTTCTTCATTTATCTTCTTCCACCTATAATCTTTAATGCAGGGTTTTCGGTGAAGAAGAAGCAGTTCTTTCATAACTTTTTTCCGATTATGTTGTTTGGAGTCACCGGAGTTTTCATATCAACTTCCATCGTTGCCGCTGGTTGCTGGTGGTTGTTTCCAAAATTGGGGCTCAAGGGTTTGACTATCAGCGAGTATCTTAGCATAGGGACCATTTTCTCATCTACAGATACTGTATGCACATTACAGGTTTTGCATCAAGACGATACACCTTTGCTATACAGTCTAGTTTTTGGTGAAGGAGTGGTAAACGATGCAACATCAGTTGTTCTCTTCAATGCGGTTCGGAAGATCACTGCAAGTACGCTTGGTGTCAAAGCCGCTTTGCGGATCATATTAGATTTCTTGTATTTGTTCTCTACAAGCACTGTTCTTGGAGTTTCTGCCGGGCTTTTGACGTCGTATATTCTCAGAGGTTTGGGCTTCGGAAGGCATTCAAGTGTACGCGAAATTTCTTTGATGATCCTGATAGCATATTTGTCCTACATGTTAGCAGAGTTATTTGAACTCAGTGGGATATTGACGGTCTTTTTTGCTGGAGTTCTGATGTCACACTATGCATGGCATAATGTAACTGAAAGCTCTAGAATTACAACCAGGCATGCTTTTGCAGCGTTCTCTTTTATTGCAGAAACATTCATATTTCTTTATGTGGGAATGGATGCACTGGACTATGAGAAGTGGAAAATGAGCATATTAAGTTTTTGGACTTCAATAGGCATATACAGCACTGTGATGTTGTTGATATTGGTTGGACGTGCTGCTTTCGTGTTTCCTCTTTCTTTATTTGCTAATTACATGCATAGACGTGATGACCCTTCATCAAAAATCACAGGACAACACCAGGTAGTAATATGGTGGGCTGGTCTGATGAGAGGTGCCGTCTCCGTCGCTTTGGCATTCAAACAGTTTACGCTCTCTGGTGTGACACTCGATCCAATCAATGCGACAATGATCACCGCGACTACTGTGATCGTGTTATTCAGTACTGTTGTTTTTGGTTTTTTGACAAAGCCACTTATTAGATACCTTCTTCCTTCTAATACAAGTAACTCGGGTCCATCCAGAACGACATCTCTCAAAGAGGATATCACACTGCCATTACTTTCGTTTGAAGAATCCGCTTCCGAGAATCTCTCTAGAGCAAAAGAGAACATATCAATGCTAATGGAAAGACCTGTTTACACGATCCACTCCTATTGGAGGAGATTCGACGACACTTATATGCGACCTATATTCGGTGGGGCCCGAACCAACGACCTTTCGTAG | 1593 | 42.88 | MDHILNTTTTTTFFSDVPINLATTHRQVVPITLFVAVLCLCLVIGHLLDENRWVNESITAIIIGCVVGTIILCASKWKSSQLLRFDEELFFIYLLPPIIFNAGFSVKKKQFFHNFFPIMLFGVTGVFISTSIVAAGCWWLFPKLGLKGLTISEYLSIGTIFSSTDTVCTLQVLHQDDTPLLYSLVFGEGVVNDATSVVLFNAVRKITASTLGVKAALRIILDFLYLFSTSTVLGVSAGLLTSYILRGLGFGRHSSVREISLMILIAYLSYMLAELFELSGILTVFFAGVLMSHYAWHNVTESSRITTRHAFAAFSFIAETFIFLYVGMDALDYEKWKMSILSFWTSIGIYSTVMLLILVGRAAFVFPLSLFANYMHRRDDPSSKITGQHQVVIWWAGLMRGAVSVALAFKQFTLSGVTLDPINATMITATTVIVLFSTVVFGFLTKPLIRYLLPSNTSNSGPSRTTSLKEDITLPLLSFEESASENLSRAKENISMLMERPVYTIHSYWRRFDDTYMRPIFGGARTNDLS | 530 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fli1g00670 | 530 | NCBIfam | sodium-hydrogen exchanger 3 | 28 | 488 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Fli1g00670 | 530 | PRINTS | Na+-H+ exchanger signature | 103 | 117 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Fli1g00670 | 530 | PRINTS | Na+-H+ exchanger signature | 118 | 126 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Fli1g00670 | 530 | PRINTS | Na+-H+ exchanger signature | 89 | 100 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Fli1g00670 | 530 | PRINTS | Na+-H+ exchanger signature | 158 | 168 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Fli1g00670 | 530 | PANTHER | SODIUM-HYDROGEN EXCHANGER | 28 | 525 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) | |
| Fli1g00670 | 530 | Gene3D | - | 28 | 457 | IPR038770 | - | |
| Fli1g00670 | 530 | Pfam | Sodium-hydrogen exchanger family | 45 | 449 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) | |
| Fli1g00670 | 530 | Coils | Coil | 480 | 500 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fli1g00670 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fli | Fli-Chr1:14062382 | Fli3g00726 | Fli-Chr3:19867076 | dispersed | |
| Fli | Fli-Chr1:14062382 | Fli8g01148 | Fli-Chr8:33033793 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Fli1g00670 | . | 12 | 525 | Antiporters gene family | AT5G55470 | 70.039 | 0.0 | 743.0 | |
| Fli1g01164 | . | 37 | 835 | Antiporters gene family | AT5G37060 | 43.424 | 0.0 | 687.0 | |
| Fli1g02286 | . | 58 | 564 | Antiporters gene family | AT5G17860 | 42.572 | 2.40e-143 | 426.0 | |
| Fli1g03375 | . | 7 | 144 | Antiporters gene family | AT5G33320 | 37.931 | 1.10e-19 | 82.4 | |
| Fli2g00123 | . | 1 | 296 | Antiporters gene family | AT1G79900 | 68.627 | 1.84e-145 | 409.0 | |
| Fli2g00418 | ACH | 1 | 689 | Antiporters gene family | AT3G62270 | 75.143 | 0.0 | 1069.0 | |
| Fli2g00588 | . | 6 | 302 | Antiporters gene family | AT5G17400 | 74.411 | 1.62e-164 | 457.0 | |
| Fli2g02145 | . | 33 | 972 | Antiporters gene family | AT2G01980 | 70.75 | 0.0 | 1319.0 | |
| Fli2g02146 | . | 1011 | 1142 | Antiporters gene family | AT2G01980 | 28.169 | 6.30e-07 | 45.4 | |
| Fli2g02155 | . | 93 | 563 | Antiporters gene family | AT5G64290 | 71.125 | 0.0 | 696.0 | |
| Fli2g02594 | . | 16 | 371 | Antiporters gene family | AT1G61800 | 71.467 | 1.23e-180 | 505.0 | |
| Fli3g00726 | ACH | 15 | 534 | Antiporters gene family | AT3G05030 | 62.835 | 0.0 | 662.0 | |
| Fli3g01251 | . | 30 | 283 | Antiporters gene family | AT1G79900 | 29.286 | 7.09e-34 | 124.0 | |
| Fli3g01865 | . | 1 | 557 | Antiporters gene family | AT5G12860 | 80.961 | 0.0 | 879.0 | |
| Fli3g02304 | . | 215 | 656 | Antiporters gene family | AT5G25430 | 64.889 | 0.0 | 585.0 | |
| Fli4g00064 | . | 418 | 591 | Antiporters gene family | AT2G19600 | 83.333 | 2.40e-85 | 260.0 | |
| Fli4g01005 | . | 227 | 563 | Antiporters gene family | AT5G64290 | 82.196 | 0.0 | 579.0 | |
| Fli4g01347 | ACH | 25 | 376 | Antiporters gene family | AT1G55730 | 59.091 | 5.05e-140 | 404.0 | |
| Fli4g01771 | . | 18 | 290 | Antiporters gene family | AT3G06370 | 79.853 | 2.74e-162 | 461.0 | |
| Fli4g01819 | WGDA | 62 | 407 | Antiporters gene family | AT5G17630 | 79.191 | 0.0 | 540.0 | |
| Fli4g01937 | . | 30 | 259 | Antiporters gene family | AT1G79900 | 31.538 | 7.68e-34 | 124.0 | |
| Fli4g01936 | ACH | 30 | 283 | Antiporters gene family | AT1G79900 | 32.746 | 1.19e-41 | 144.0 | |
| Fli4g02031 | ACH | 1 | 795 | Antiporters gene family | AT4G23700 | 63.454 | 0.0 | 1004.0 | |
| Fli5g00856 | . | 7 | 144 | Antiporters gene family | AT5G33320 | 37.241 | 9.62e-19 | 80.1 | |
| Fli5g01159 | . | 10 | 328 | Antiporters gene family | AT1G15460 | 77.429 | 0.0 | 516.0 | |
| Fli6g00164 | . | 56 | 144 | Antiporters gene family | AT5G33320 | 41.489 | 3.00e-15 | 70.1 | |
| Fli6g00853 | . | 59 | 89 | Antiporters gene family | AT2G19600 | 67.742 | 3.37e-08 | 48.5 | |
| Fli6g00894 | . | 5 | 127 | Antiporters gene family | AT2G38170 | 52.846 | 1.40e-37 | 131.0 | |
| Fli6g01014 | . | 37 | 385 | Antiporters gene family | AT1G08960 | 59.444 | 1.64e-135 | 397.0 | |
| Fli6g01295 | ACH,WGDA | 1 | 776 | Antiporters gene family | AT1G16380 | 39.467 | 0.0 | 556.0 | |
| Fli6g01453 | . | 59 | 89 | Antiporters gene family | AT2G19600 | 64.516 | 7.20e-07 | 45.8 | |
| Fli6g01867 | WGDA | 1 | 383 | Antiporters gene family | AT5G13490 | 76.501 | 0.0 | 561.0 | |
| Fli7g00232 | . | 86 | 404 | Antiporters gene family | AT5G33320 | 68.923 | 1.20e-156 | 446.0 | |
| Fli7g01787 | ACH | 3 | 534 | Antiporters gene family | AT3G05030 | 61.798 | 0.0 | 656.0 | |
| Fli7g01876 | . | 1 | 697 | Antiporters gene family | AT2G47160 | 80.905 | 0.0 | 1146.0 | |
| Fli8g00167 | . | 59 | 89 | Antiporters gene family | AT2G19600 | 67.742 | 2.57e-08 | 48.9 | |
| Fli8g00782 | WGDA | 49 | 384 | Antiporters gene family | AT5G13490 | 81.065 | 0.0 | 543.0 | |
| Fli8g01133 | . | 7 | 101 | Antiporters gene family | AT3G05030 | 75.258 | 9.07e-41 | 142.0 | |
| Fli8g01148 | . | 13 | 476 | Antiporters gene family | AT3G05030 | 32.573 | 4.92e-54 | 189.0 | |
| Fli8g01231 | . | 7 | 101 | Antiporters gene family | AT3G05030 | 74.227 | 2.77e-40 | 140.0 | |
| Fli9g00153 | . | 43 | 410 | Antiporters gene family | AT5G46110 | 73.087 | 0.0 | 551.0 | |
| Fli9g00628 | WGDA | 314 | 380 | Antiporters gene family | AT3G08580 | 88.06 | 1.79e-35 | 120.0 | |
| Fli9g00629 | . | 1 | 265 | Antiporters gene family | AT5G13490 | 73.034 | 9.36e-131 | 374.0 | |
| Fli9g01269 | . | 32 | 440 | Antiporters gene family | AT2G38170 | 59.413 | 2.19e-164 | 469.0 | |
| Fli9g01488 | . | 55 | 801 | Antiporters gene family | AT3G52080 | 45.588 | 0.0 | 682.0 | |
| Fli9g01575 | . | 1 | 410 | Antiporters gene family | AT5G46110 | 76.923 | 0.0 | 627.0 | |
| Fli10g00866 | ACH | 47 | 439 | Antiporters gene family | AT1G55730 | 71.392 | 0.0 | 580.0 | |
| Fli10g01936 | . | 58 | 566 | Antiporters gene family | AT5G17860 | 44.015 | 6.79e-143 | 423.0 | |
| Fli11g01952 | WGDA | 1 | 687 | Antiporters gene family | AT3G62270 | 75.862 | 0.0 | 1077.0 | |
| Fli11g01953 | . | 7 | 404 | Antiporters gene family | AT5G33320 | 64.938 | 2.08e-178 | 501.0 | |
| Fli11g02141 | WGDA | 1 | 105 | Antiporters gene family | AT5G54800 | 39.516 | 1.06e-11 | 58.2 | |
| Fli11g02142 | WGDA | 140 | 381 | Antiporters gene family | AT1G61800 | 84.711 | 6.57e-150 | 421.0 | |
| Fli11g02185 | . | 712 | 811 | Antiporters gene family | AT2G13620 | 75.0 | 7.89e-44 | 150.0 | |
| Fli12g00346 | ACH | 14 | 773 | Antiporters gene family | AT1G79400 | 37.161 | 1.28e-168 | 504.0 | |
| Fli12g01361 | . | 30 | 283 | Antiporters gene family | AT1G79900 | 32.77 | 4.51e-40 | 140.0 | |
| Fli12g01374 | ACH | 30 | 283 | Antiporters gene family | AT1G79900 | 32.77 | 1.69e-39 | 139.0 | |
| Fli12g01547 | . | 10 | 298 | Antiporters gene family | AT5G17400 | 36.949 | 1.31e-62 | 199.0 | |
| Fli12g01587 | WGDA | 7 | 543 | Antiporters gene family | AT3G05030 | 74.026 | 0.0 | 808.0 | |
| Fli13g00548 | WGDA | 1 | 383 | Antiporters gene family | AT5G13490 | 77.285 | 0.0 | 568.0 | |
| Fli13g00651 | . | 56 | 377 | Antiporters gene family | AT3G01550 | 67.802 | 1.07e-156 | 446.0 | |
| Fli13g01028 | . | 383 | 776 | Antiporters gene family | AT1G16380 | 42.424 | 1.46e-108 | 335.0 | |
| Fli13g01029 | WGDA | 1 | 313 | Antiporters gene family | AT1G79400 | 38.602 | 3.11e-59 | 201.0 | |
| Fli13g01605 | . | 7 | 101 | Antiporters gene family | AT3G05030 | 75.258 | 9.07e-41 | 142.0 | |
| Fli14g00147 | ACH | 21 | 89 | Antiporters gene family | AT1G64170 | 69.565 | 5.17e-29 | 105.0 | |
| Fli14g00148 | . | 20 | 810 | Antiporters gene family | AT5G41610 | 64.987 | 0.0 | 1001.0 | |
| Fli14g00378 | . | 11 | 91 | Antiporters gene family | AT5G27150 | 36.471 | 3.24e-06 | 42.0 | |
| Fli14g00690 | WGDA | 110 | 543 | Antiporters gene family | AT3G05030 | 71.659 | 0.0 | 646.0 | |
| Fli14g00691 | WGDA | 15 | 92 | Antiporters gene family | AT3G06370 | 74.359 | 6.96e-35 | 122.0 | |
| Fli14g01912 | . | 48 | 576 | Antiporters gene family | AT3G19490 | 81.262 | 0.0 | 822.0 | |
| Fli15g00522 | . | 59 | 89 | Antiporters gene family | AT2G19600 | 67.742 | 2.83e-08 | 48.9 | |
| Fli15g01778 | . | 1 | 116 | Antiporters gene family | AT5G46110 | 43.443 | 7.34e-19 | 79.0 | |
| Fli16g00048 | . | 60 | 89 | Antiporters gene family | AT2G19600 | 66.667 | 1.76e-07 | 46.6 | |
| Fli17g00239 | WGDA | 1 | 387 | Antiporters gene family | AT5G54800 | 73.35 | 0.0 | 553.0 | |
| Fli17g00418 | ACH,WGDA | 1 | 687 | Antiporters gene family | AT3G62270 | 75.971 | 0.0 | 1088.0 | |
| Fli17g00782 | . | 107 | 227 | Antiporters gene family | AT1G74810 | 65.289 | 1.62e-52 | 173.0 | |
| Fli18g00034 | . | 44 | 349 | Antiporters gene family | AT2G19600 | 80.128 | 5.29e-172 | 489.0 | |
| Fli18g00408 | . | 424 | 563 | Antiporters gene family | AT5G64290 | 84.286 | 7.42e-82 | 249.0 | |
| Fli18g01034 | WGDA | 65 | 407 | Antiporters gene family | AT5G17630 | 78.098 | 0.0 | 542.0 | |
| Fli18g01053 | WGDA | 65 | 407 | Antiporters gene family | AT5G17630 | 77.522 | 0.0 | 538.0 | |
| Fli10000789.1g00001 | . | 1 | 90 | Antiporters gene family | AT3G62270 | 68.889 | 7.22e-40 | 137.0 | |
| Fli10000920.1g00007 | . | 1 | 826 | Antiporters gene family | AT3G53720 | 65.338 | 0.0 | 1021.0 |