AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli2g01934 ATGAAGTCATCATTTGGGAAGATTGGGCGCAAATTGACGATGCAGAAGAGCGATGTGAAGGAGATGAGAGATCATCAGCCTTCCGCTCATTTAGATGAGCTTGCTCAGGCTTCGAAGGATATGGAAGATATGAAGAACTGCTATGATGGCTTATTATCTGCGGCTGCTGCAACTGCGAATAGTATATATGAATTTTCGGAATCGCTAAATGAAATGGGGAACTGTTTAATGGGGAAAACTGCTGCAGCCGCTGATGCTGAAAGTGGAAACGCGCTATCAAATCTGGGGAATTTGCAATTGGAACTTCAGAAAATTGCTGATACTTATCGTTCTTATGTAGTTGTGACGATTACTAACCCAGCAGATTCTCTTCTCAGTGAGCTACTAAAAGTGGAGGAGATGAAACTTCAGTGTGATGAGAAAAGAGAGGTGTATGATCACTTGATGGCTCAAAATAGAGAAAAGGGAAGACTGAAGAATGGTAAAATAGAAAGTTCAATTGCGCAAAAACTGAAAGAAGCTCAAGATGAATATGATGAAGTGGCTAGACTATGTGTATTTCGGGTAAAATCACTTAAGGAAGGGCAATGGCGCAGTCTTCTAACACAAGCTGCTCGCCATCATGCCGCACAGCTGAATTTCTTTCGCAAAGGACTTAAAGCTGTTGAAGCAGTTGAACCTTTTATAAGAAATGTCACAGAAAAGCATCGTATTGATTGCCAACTCAGTGGATTGCATGATCATGGTTCCCAGGAAGGTGAACCTATGAGTGTCTATGAAAGCACTAATGATGGAGGATTGAGTTTTGATTATAAACAAAAGAAACAAGGACTTGATGATGATGGCACCTTGCCAAATCCAATGGAGGTAGATGTCTCGTATTTTCAAGCTTCAAATCTAGAAGATTCACAGATAAATCAGAATAAACATAAAAGCGAGCAGTTTTTTGGTAAGCAAACTAGAGTTAGCAGTTATTCGGCCCCGCTATTCCCCGACAAAAGTAATGCACCCGGAAAGCTTAAAGAAACCCAACCCACATCGAAATTTCACTCTTACATATTACCTCCACCCAATGTGGATACCCGGAATCCAGTTTCAAAACCCACTACATCTTCTTATTCCACCCCAGTTCAAAATCTGCAACATGATACCATATCAACGGCTGCTTTGACCTCAAAAGTCCAGTCGACAGTTAAAGATGGTAACCCTGTTAATCCATCCATCCAGTTACCTGCTCCATCTACTGGAAGATTTTCATTCTCACAACAGGATAACCATTACAGAACCGATGGTAGTAAAGTAGACAAACGACAATCTTACTCTGGCCCGTTACCACCAAGCAAGCAGTTCTCTTTTAAACTTGCAACTAATAGTAGCGGGCCCATTACTTCTACTGAACTTCCTCACCCGCCTTCTCGGGTCCCAGTTTCTCAGCCAAATTTGTCAACTAGCACGTCATCTCCCTCTTTATCTTCTCCTAAAATAAGCGAGCTTCATGAGCTTCCTAGGCCTCCTCTGAGTAATATAGCCTTCTCTAAACCTGTTGCTATTTCTGGTGGTTTGAACCGGCATTCAGCACCCCTACTTTTGAAAAATCAAGAAATTTCGCTACCTAATAAACGCGCTATGCTAACATCGACTTGTGCATCACCTCTTCCACTTCCACCTTCTGTTGTGAAAATCAACTCGAGTAACAGCAGAACCTGA 1707 41.89 MKSSFGKIGRKLTMQKSDVKEMRDHQPSAHLDELAQASKDMEDMKNCYDGLLSAAAATANSIYEFSESLNEMGNCLMGKTAAAADAESGNALSNLGNLQLELQKIADTYRSYVVVTITNPADSLLSELLKVEEMKLQCDEKREVYDHLMAQNREKGRLKNGKIESSIAQKLKEAQDEYDEVARLCVFRVKSLKEGQWRSLLTQAARHHAAQLNFFRKGLKAVEAVEPFIRNVTEKHRIDCQLSGLHDHGSQEGEPMSVYESTNDGGLSFDYKQKKQGLDDDGTLPNPMEVDVSYFQASNLEDSQINQNKHKSEQFFGKQTRVSSYSAPLFPDKSNAPGKLKETQPTSKFHSYILPPPNVDTRNPVSKPTTSSYSTPVQNLQHDTISTAALTSKVQSTVKDGNPVNPSIQLPAPSTGRFSFSQQDNHYRTDGSKVDKRQSYSGPLPPSKQFSFKLATNSSGPITSTELPHPPSRVPVSQPNLSTSTSSPSLSSPKISELHELPRPPLSNIAFSKPVAISGGLNRHSAPLLLKNQEISLPNKRAMLTSTCASPLPLPPSVVKINSSNSRT 568
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli2g01934 568 MobiDBLite consensus disorder prediction 442 466 - -
Fli2g01934 568 MobiDBLite consensus disorder prediction 327 379 - -
Fli2g01934 568 Coils Coil 131 151 - -
Fli2g01934 568 MobiDBLite consensus disorder prediction 396 427 - -
Fli2g01934 568 Gene3D Arfaptin homology (AH) domain-BAR domain 26 241 IPR027267 -
Fli2g01934 568 MobiDBLite consensus disorder prediction 396 501 - -
Fli2g01934 568 CDD BAR 40 227 - -
Fli2g01934 568 MobiDBLite consensus disorder prediction 363 379 - -
Fli2g01934 568 MobiDBLite consensus disorder prediction 246 265 - -
Fli2g01934 568 Pfam BAR domain of APPL family 30 235 IPR004148 GO:0005515(InterPro)|GO:0005737(InterPro)
Fli2g01934 568 SUPERFAMILY BAR-IMD domain-like 32 230 IPR027267 -
Fli2g01934 568 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 560 IPR037488 -
Fli2g01934 568 MobiDBLite consensus disorder prediction 476 494 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli2g01934 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
88616 Fli2g01480 Fli2g01934
88632 Fli2g01934 Fli6g01739
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr2:35379183 Fli6g01739 Fli-Chr6:80617507 dispersed
Fli Fli-Chr1:73018158 Fli2g01934 Fli-Chr2:35379183 transposed
Fli Fli-Chr12:67022596 Fli2g01934 Fli-Chr2:35379183 wgd
Fli Fli-Chr2:26743594 Fli2g01934 Fli-Chr2:35379183 wgd