AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli2g01935 ATGGCAGTCAAGGCCGCGATTCACTTTTCCGACGTGCCGCATTTGGATCACGTCAACGACGCCGCCGCCGCGTCGCTGTCGCTCTACGCCACCCGTCTCCCCACCGGTTTGGATGTGAGTAATGGCCCCAAAGTTTTGCCCAAATTCATGGTGGTCGGTCACCGGGGCCATGGGATGAACATCTTACAGTCGAACGATAACAGGATGAAGGTGTATAAGGAGAATTCGATTCTTTCGTTCAACAACGCCGCTAATCATCCTATCGATTACATTGAATTTGATGTTCAGGTGACAAAAGACGACACACCAGTCATCTTTCACGACAATTTCATCCTGTCTGAAGAGAATGGTAACATAGTTGAAAAACGAGTCACCGATTTGACTTTGGACGAGTTCTTCAGTTATGGTCCTCAACGCGAAACAGGTCGGGTGGGAAAAACATTGCTGAGAAGATCAAACGGAAAGATTGTCGGGTGGGACGTTGAGATCGATGATCATTCTTGCACTCTTGATGAAGCATTCCAGAAAGTGAACCCTTGTTTGGGATTTAACATTGAGTTGAAATTTGATGATTACATTGTTTATGAGGAAGAGTATCTCATTCATGTTCTTCAAGTTATCTTAAAGGTGGTATATGAAAACGCCCAAGAAAGACCTGTACTTTTCTCAAGCTTCCAGCCTGATGTGGCCTTGCTTATGAAGAAGCTTCAACATAAATACCCGGTGTACTTCTTGACAAACGGCGGAAATGAGATATTCGATGACGTTCGAATGAACTCGTTAGAAGAAGCGAAGAAGCTGGCCATATCGGGTGGTTTGGACGGAGTTGTTTCGGAAGTAAAGGGTATATTTAGAAACCCTTCAGTAGTAAGAGAGATCAAAGAATCAAATCTCTCCCTCCTTACTTATGGCAAACTAAATAACGTCCCTGAAGCCGTACACGTCCAATATCTTATGGGCGTCGAGGGTGTCATTGTTGACCTAGTACAAGAAATTACAAGTGCAGTTGCAGTTTTAAAAACAGGATTTGAAGGAGAGGAAGGAGGATCACAGGTGAAAGAGAACAGCGGCAAGATCGAACTGCCGTTCTTGCTGAGTTTGATTTCACAAGTGATTCAGCATTGA 1125 44.44 MAVKAAIHFSDVPHLDHVNDAAAASLSLYATRLPTGLDVSNGPKVLPKFMVVGHRGHGMNILQSNDNRMKVYKENSILSFNNAANHPIDYIEFDVQVTKDDTPVIFHDNFILSEENGNIVEKRVTDLTLDEFFSYGPQRETGRVGKTLLRRSNGKIVGWDVEIDDHSCTLDEAFQKVNPCLGFNIELKFDDYIVYEEEYLIHVLQVILKVVYENAQERPVLFSSFQPDVALLMKKLQHKYPVYFLTNGGNEIFDDVRMNSLEEAKKLAISGGLDGVVSEVKGIFRNPSVVREIKESNLSLLTYGKLNNVPEAVHVQYLMGVEGVIVDLVQEITSAVAVLKTGFEGEEGGSQVKENSGKIELPFLLSLISQVIQH 374
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli2g01935 374 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 44 337 IPR051578 GO:0046475(PANTHER)
Fli2g01935 374 Pfam Glycerophosphoryl diester phosphodiesterase family 54 329 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Fli2g01935 374 ProSiteProfiles GP-PDE domain profile. 49 336 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Fli2g01935 374 SUPERFAMILY PLC-like phosphodiesterases 47 330 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Fli2g01935 374 Gene3D Phosphatidylinositol (PI) phosphodiesterase 46 337 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Fli2g01935 374 FunFam Glycerophosphodiester phosphodiesterase GDPD2 41 338 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli2g01935 K18696 glycerophosphodiester phosphodiesterase [EC:3.1.4.46]
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Event-related genes

Select Gene_1 Gene_2 Event_name
87801 Fli13g00609 Fli2g01935
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr2:35387551 Fli5g01868 Fli-Chr5:54740902 dispersed
Fli Fli-Chr13:12848116 Fli2g01935 Fli-Chr2:35387551 wgd