AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fli2g01938 | ATGGAGAATCACAACCCGCCACCACCACACACCCCCACCGGAAACCCTGATGATCACAACACAAAACTCCACGATGAACCCCAAATCACATCTCAAGATAATAATCTCTACCAACAGATCGATCGATTCACCTCTGCATTAACAAACAATCAACAATCGGACTCATCATCTCCACCTGAAATCTCAGAATCCGTTCAAACATTTGCAGATCTTTTCGATGTTATGATCGTTGAACACGAATCGGGGGCCAAGAGATGGGTTCATCTTGAAGAAGATGAATCTTTACGTTTTATAGATTTCGTTGATCGAACGGCGAAGGTTATTAACTCTCTTTCGAGGTTTCATTCCGATCAACGTTACGCCGGTGCGATCAACCGGTTGAGCGGTGTTCAGCAGCGTGCGATGTCGGTATTGGAGGTTGAATTCAAATCGATGATGGATGATTTTCAAAGCTTATGTGATGGAGATCAGAAAGATCAAACCCATGAAGCGAAAACGAAAGAGTCTTCGTCTTCTTCGACCAATGTTGATCAAGAAGCTTTACCGCCGGAGTTGCAGGCTCAATCGGAATCCCCGCCGGAGAAAGATGATCAATTCTTAGGATATTCAGATGAGACGGTATCTCATTTGAAGAAATTAGCTAAAGGATTGATCATCGGAGGTCATGAATCGGAGTGTGGTGAATTGTATTTCTTTGCTAGAAGAAACGCCATGGAAGAACATCTAAAGCTTCATCGGTTTGAGAAATTCTCCATCGACGAAATGCAGAAGATGCAATGGGAGCCGATAGAGAAGGAGATATCATCATCGATGAAGATGTTCAGACAAATTTGTACGTCACTTTTACCCAAAGAGCAGAAGCTAGCAGACGCCATTTTCTCCGGCGAGAAAGCAATCTCCAACGGTGTATTCACCCACCTAACACGAATCATCCTCTTGATCTTTTTAACATTTGCAGAGGCCGTGATGTTGACGAAACGATCGCCGGAGAAACTGTTGAACTTCCTCGACGTTTACGAGACGTTACGTGACAGCATCCCGGAGGTCGAGAAACTGATCTCCGACGAAGGGCTACACCAGCTGAAATCTTCATCTTCTTTGATCACCACCATGTTAGGACACTCCATCATCAACATATTTGCAGACCTCGAAACCTCCATCAAATCCGACGCTTCAAAAACTCCGGTCCCCGGCGGAGCCGTACATCCGATCACCCGTTACACCATGAACTACCTGAAATCCGCCTGTGAGTACAGCGACACACTGGAGCAAATATTCCGACAACACAAAGCCACCGACCCACCGGACTCCACCACCGTCTCCGGCGACCCGAATTCTTACCAACCGAATCAACCCACCAACGAATCAGCAAACGGGTCACCGTTCCAATCTCAATTAACCTCAATCATGGATCAATTAGACTCAAACCTCGAATCAAAATCAAAGCTTTACAAAGACCCATCGTTGAGCTTGATCTTCATGATGAACAACGGGCGTTACATACTGCAGAAGACCAAAGGCACCGGAGAGATGAGAACCTTGATGGGCGACCCATGGGTGAGAAAACGGTCATCGGATCTTCGAGCATACCACACGAACTACAAGCGCGAAACGTGGACGAAGCTGTTGCAGTGTTTGAGTCACGAGGGGTTGAGTGTCAACGGGAAGGTGATGAAGCCAGTGCTGAAAGAGCGATTCAAGAGCTTCAATGTGATGTTCGATGAGATCTACAGATCGCAGACGACGTGGGTGGTGAGTGACGAGCAGCTGCAGTCGGAACTGAGGGTGTCGATATCGGCGATCGTGATTCCGGCGTATAGGTCGTTCATGGGGAGGTTCAGTCAGGTGTTTACTCCGGGGAGGCAGACGGAGAAGTATATAAAGTATCAGCCGGAGGATATTGAGACGTGTATCGAAGAGTTGTTTGATGGGAGTGCAGCCCAACTGAGTAAGAAGAGATAA | 1962 | 46.99 | MENHNPPPPHTPTGNPDDHNTKLHDEPQITSQDNNLYQQIDRFTSALTNNQQSDSSSPPEISESVQTFADLFDVMIVEHESGAKRWVHLEEDESLRFIDFVDRTAKVINSLSRFHSDQRYAGAINRLSGVQQRAMSVLEVEFKSMMDDFQSLCDGDQKDQTHEAKTKESSSSSTNVDQEALPPELQAQSESPPEKDDQFLGYSDETVSHLKKLAKGLIIGGHESECGELYFFARRNAMEEHLKLHRFEKFSIDEMQKMQWEPIEKEISSSMKMFRQICTSLLPKEQKLADAIFSGEKAISNGVFTHLTRIILLIFLTFAEAVMLTKRSPEKLLNFLDVYETLRDSIPEVEKLISDEGLHQLKSSSSLITTMLGHSIINIFADLETSIKSDASKTPVPGGAVHPITRYTMNYLKSACEYSDTLEQIFRQHKATDPPDSTTVSGDPNSYQPNQPTNESANGSPFQSQLTSIMDQLDSNLESKSKLYKDPSLSLIFMMNNGRYILQKTKGTGEMRTLMGDPWVRKRSSDLRAYHTNYKRETWTKLLQCLSHEGLSVNGKVMKPVLKERFKSFNVMFDEIYRSQTTWVVSDEQLQSELRVSISAIVIPAYRSFMGRFSQVFTPGRQTEKYIKYQPEDIETCIEELFDGSAAQLSKKR | 653 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fli2g01938 | 653 | MobiDBLite | consensus disorder prediction | 151 | 200 | - | - | |
| Fli2g01938 | 653 | MobiDBLite | consensus disorder prediction | 431 | 463 | - | - | |
| Fli2g01938 | 653 | MobiDBLite | consensus disorder prediction | 152 | 166 | - | - | |
| Fli2g01938 | 653 | MobiDBLite | consensus disorder prediction | 430 | 463 | - | - | |
| Fli2g01938 | 653 | Pfam | Exocyst complex component Exo70 N-terminal | 91 | 147 | - | - | |
| Fli2g01938 | 653 | Pfam | Exo70 exocyst complex subunit C-terminal | 269 | 640 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
| Fli2g01938 | 653 | MobiDBLite | consensus disorder prediction | 167 | 185 | - | - | |
| Fli2g01938 | 653 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 69 | 645 | IPR004140 | GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER) | |
| Fli2g01938 | 653 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
| Fli2g01938 | 653 | Gene3D | Exocyst complex component Exo70 | 71 | 652 | - | - | |
| Fli2g01938 | 653 | SUPERFAMILY | Cullin repeat-like | 91 | 643 | IPR016159 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fli2g01938 | K07195 | exocyst complex component 7 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fli | Fli-Chr2:35450021 | Fli5g00590 | Fli-Chr5:10008530 | dispersed | |
| Fli | Fli-Chr2:35450021 | Fli9g00012 | Fli-Chr9:586816 | transposed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Fli2g00023 | ACH | 20 | 633 | EXO70 exocyst subunit family | AT1G72470 | 64.082 | 0.0 | 800.0 | |
| Fli2g01252 | ACH | 9 | 209 | EXO70 exocyst subunit family | AT3G29400 | 42.654 | 3.21e-36 | 132.0 | |
| Fli2g01253 | . | 256 | 658 | EXO70 exocyst subunit family | AT3G29400 | 48.768 | 1.19e-133 | 396.0 | |
| Fli2g01938 | . | 72 | 653 | EXO70 exocyst subunit family | AT5G13150 | 45.91 | 2.54e-179 | 522.0 | |
| Fli2g03737 | ACH | 7 | 632 | EXO70 exocyst subunit family | AT5G03540 | 76.153 | 0.0 | 974.0 | |
| Fli3g00224 | . | 11 | 599 | EXO70 exocyst subunit family | AT5G59730 | 50.42 | 0.0 | 551.0 | |
| Fli3g00339 | . | 1 | 624 | EXO70 exocyst subunit family | AT5G58430 | 57.978 | 0.0 | 726.0 | |
| Fli4g00847 | . | 381 | 499 | EXO70 exocyst subunit family | AT3G14090 | 36.364 | 1.20e-16 | 78.2 | |
| Fli4g02393 | . | 12 | 657 | EXO70 exocyst subunit family | AT4G31540 | 42.466 | 4.61e-168 | 494.0 | |
| Fli5g00590 | ACH | 52 | 644 | EXO70 exocyst subunit family | AT5G13150 | 40.394 | 6.70e-148 | 441.0 | |
| Fli6g01929 | WGDA | 32 | 608 | EXO70 exocyst subunit family | AT3G09520 | 51.115 | 0.0 | 573.0 | |
| Fli9g00012 | ACH | 113 | 653 | EXO70 exocyst subunit family | AT5G13150 | 44.182 | 4.09e-167 | 493.0 | |
| Fli10g00494 | ACH,WGDA | 20 | 633 | EXO70 exocyst subunit family | AT1G72470 | 61.624 | 0.0 | 754.0 | |
| Fli10g01954 | ACH,WGDA | 26 | 633 | EXO70 exocyst subunit family | AT1G72470 | 64.96 | 0.0 | 791.0 | |
| Fli12g00793 | ACH | 336 | 658 | EXO70 exocyst subunit family | AT3G29400 | 49.691 | 8.90e-100 | 305.0 | |
| Fli12g00794 | ACH | 9 | 265 | EXO70 exocyst subunit family | AT3G29400 | 48.507 | 2.18e-60 | 201.0 | |
| Fli13g00504 | WGDA | 32 | 608 | EXO70 exocyst subunit family | AT3G09520 | 52.405 | 0.0 | 586.0 | |
| Fli15g00471 | ACH,WGDA | 25 | 632 | EXO70 exocyst subunit family | AT1G72470 | 62.821 | 0.0 | 755.0 | |
| Fli15g01237 | ACH | 8 | 638 | EXO70 exocyst subunit family | AT5G03540 | 79.685 | 0.0 | 1008.0 | |
| Fli16g01403 | . | 24 | 682 | EXO70 exocyst subunit family | AT5G50380 | 57.079 | 0.0 | 715.0 | |
| Fli17g01103 | . | 7 | 631 | EXO70 exocyst subunit family | AT5G52340 | 70.88 | 0.0 | 942.0 | |
| Fli10000358.1g00001 | . | 12 | 636 | EXO70 exocyst subunit family | AT4G31540 | 28.006 | 3.55e-76 | 256.0 | |
| Fli10000277.1g00001 | . | 7 | 185 | EXO70 exocyst subunit family | AT1G51640 | 34.615 | 7.55e-21 | 88.2 | |
| Fli10000403.1g00001 | . | 32 | 608 | EXO70 exocyst subunit family | AT3G09520 | 51.115 | 0.0 | 573.0 |