Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fli2g01940 | ATGGAGGATGAGTATGCAAAACTTATCAGGAGGATGAATCCACCCAGAGTTACAATCGACAACGATTCGTCCTCAGATGCAACAGTTATCCAGGTTGAAAGTGTTAATAAGCATGGTAGTCTGCTGGAAGTTGTGCAAGTTTTTGCGGATTTAGATCTTGTTATTAAAAAGGCTTATATTTCATCAGATGCTGGATGGTTCATGGATGTGTTCAATGTTATATGCAATGACGGAAGCAAAATTAGAGATGATGGGGTAGTCAGTTATATAAAACAGGTGCTTGAAAGTGATGCATTTTACGTACCATCACTGAATGGTTCAGTTGGATTGAAGCCATCGGATGATTACACCGTAATAGAACTAGTTGGAACAGACAGACCTGGATTATTATCTGAGGTGTCTGCAGTTCTAACAAACCTTGGTTGTAATGTGCTCAATGCTGAAATATGGACTCACAATGCCAGAGCTGCAGCTGTGGTACATGTCACAGATGATAAAACAAAGTGTGCAGTTGAAGACCCAAAGCGGCTCTTGACTATTAAGAAGCTTCTTTTTAACCTTCTCAAGGGAAACAATGATTTGAAGACTGCAAAAATGACACTTTCCACCCCTGGTTCCATGCACAGACAGAGAAGATTACATCAAATTATGTTTGCTGAGAGGGATTACGAGAAAGTTGAAGAAACAGAACCAGAAAAGGAAAATAAGTTGAGAACACAGGTTACGGTTTTAGATTGTGTTGAGAAGGATTACACAGTTGTTACTATGCATTGTAGGGATAGACCAAAGCTGTTGTTTGATATTATTTGCACTCTTACCGACATGGAATATGTAGTCTTTCATGGAGTAGTTCACACAGGGAAAACGGAGGCTTTTCAGGAATATTACATTCGGCATGTTGATGGGAGTCCAGTAAGCTCAGAAGCAGAACGAGAGCGTGTTATGCAATGTCTTGAAGCTGCAATTGAGAGGAGGACATCTGAGGCGTTAGAGCTAGAATTGTGCACAACAGATCGTGTTGGACTTCTTTCAGATATAACCAGAATCTTCAGAGAAAATAGTTTGTGTATAAAAAGAGCAGAGATTTCAACCGAAGGTGGAACAGCTAAAGACAAGTTTTATGTGACTGACATGACCGGTAACAACCCTGTTGACCCAAAAACCATAGATTCTATTCGAAGACAAATCGGTCAACAAGCAGCACTGCATGTTAGATGGAATCCTACTCAAGCATCAGACCCACAACCTGAAGAAACAACAATGGGCTTTCTCTTTGGAAGTCTGTTTAGAGGCCGAACGTTTCAGACTTTGAAGTTAGTCGGCTCCTATTCCTGA | 1335 | 40.6 | MEDEYAKLIRRMNPPRVTIDNDSSSDATVIQVESVNKHGSLLEVVQVFADLDLVIKKAYISSDAGWFMDVFNVICNDGSKIRDDGVVSYIKQVLESDAFYVPSLNGSVGLKPSDDYTVIELVGTDRPGLLSEVSAVLTNLGCNVLNAEIWTHNARAAAVVHVTDDKTKCAVEDPKRLLTIKKLLFNLLKGNNDLKTAKMTLSTPGSMHRQRRLHQIMFAERDYEKVEETEPEKENKLRTQVTVLDCVEKDYTVVTMHCRDRPKLLFDIICTLTDMEYVVFHGVVHTGKTEAFQEYYIRHVDGSPVSSEAERERVMQCLEAAIERRTSEALELELCTTDRVGLLSDITRIFRENSLCIKRAEISTEGGTAKDKFYVTDMTGNNPVDPKTIDSIRRQIGQQAALHVRWNPTQASDPQPEETTMGFLFGSLFRGRTFQTLKLVGSYS | 444 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fli2g01940 | 444 | Gene3D | - | 114 | 182 | - | - | |
| Fli2g01940 | 444 | PANTHER | ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED | 7 | 406 | IPR040217 | - | |
| Fli2g01940 | 444 | ProSiteProfiles | ACT domain profile. | 29 | 107 | IPR002912 | - | |
| Fli2g01940 | 444 | CDD | ACT-ACR-3 | 251 | 325 | - | - | |
| Fli2g01940 | 444 | ProSiteProfiles | ACT domain profile. | 118 | 199 | IPR002912 | - | |
| Fli2g01940 | 444 | SUPERFAMILY | ACT-like | 113 | 173 | IPR045865 | - | |
| Fli2g01940 | 444 | ProSiteProfiles | ACT domain profile. | 331 | 407 | IPR002912 | - | |
| Fli2g01940 | 444 | Pfam | ACT domain | 117 | 166 | IPR002912 | - | |
| Fli2g01940 | 444 | SUPERFAMILY | ACT-like | 326 | 400 | IPR045865 | - | |
| Fli2g01940 | 444 | SUPERFAMILY | ACT-like | 24 | 93 | IPR045865 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fli2g01940 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 88615 | Fli2g01471 | Fli2g01940 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fli | Fli-Chr2:35467148 | Fli2g02435 | Fli-Chr2:46145644 | dispersed | |
| Fli | Fli-Chr15:54091153 | Fli2g01940 | Fli-Chr2:35467148 | transposed | |
| Fli | Fli-Chr8:8141779 | Fli2g01940 | Fli-Chr2:35467148 | transposed | |
| Fli | Fli-Chr12:66925206 | Fli2g01940 | Fli-Chr2:35467148 | wgd | |
| Fli | Fli-Chr15:60817954 | Fli2g01940 | Fli-Chr2:35467148 | wgd | |
| Fli | Fli-Chr2:26674333 | Fli2g01940 | Fli-Chr2:35467148 | wgd |