AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli2g01949 ATGCCTTCAATTCCTGAAGATCCAATTCTCGCCCCAAACCCAGATCGATTCTGCATGTTCCCAATCCAATACCCCCAAATCTGGGAAATGTACAAGAAAGCTGAAGCCTCCTTCTGGACCGCAGAAGAAGTCGATCTATCACAAGATCAACGCCACTGGGAGTCGTTGACCGACGGCGAACGCCACTTCATCACCCACGTTCTCGCCTTCTTCGCGGCCTCCGACGGCATCGTGCTCGAAAACCTCGCCGGAAGGTTCATGAAAGAGGTGCAGATCGCTGAAGCTCGTGCGTTCTACGGCTTCCAGATCGCGATTGAGAACATTCACTCCGAGATGTACAGTTTGCTGCTGGAATCGTATATCAAAGACTCCGATCAGAAGAATCGGTTGTTTCGAGCGATTGAAACGATCCCGTGTGTCGAGAAGAAGGCCAATTGGGCGCTCCGGTGGATCGACGGATCGGAGACGTTCGCCGAACGGATAATAGCGTTTGCGTGTGTCGAAGGGATCTTCTTCTCCGGCAGCTTCTGCGCTATCTTCTGGCTGAAGAAACGAGGGTTGATGCCGGGGTTAACGTTCTCTAATGAATTGATTTCACGAGACGAAGGATTACACTGCGATTTCGCTTGTTTGTTGTACGGGTTGTTGAAGACGAAGGTGAGTGAAGAACGAGTGAAGGGGATCGTTGCTGATGCGGTGGAGATTGAACGAGAGTTTGTTTGTGATGCGTTACCGTGTGCTCTTGTGGGTATGAATGGTGATCTCATGAGTCAATACATTGAATTCGTTGCTGATCGATTACTGGGTGCATTGGGGTGTAGTAAGTTGTACAATGTGCAGAATCCATTTGATTGGATGGAGCTGATTTCATTGCAGGGTAAGACGAATTTCTTTGAGAAGAGAGTTGGTGAGTATCAGAAAGCTTCTGTGATGTCGAATTTGAATGGTAATGGTGATTCTCATGTCTTCAAGATGGATGAAGACTTCTGA 990 48.38 MPSIPEDPILAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDQRHWESLTDGERHFITHVLAFFAASDGIVLENLAGRFMKEVQIAEARAFYGFQIAIENIHSEMYSLLLESYIKDSDQKNRLFRAIETIPCVEKKANWALRWIDGSETFAERIIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYGLLKTKVSEERVKGIVADAVEIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLGALGCSKLYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSNLNGNGDSHVFKMDEDF 329
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli2g01949 329 ProSitePatterns Ribonucleotide reductase small subunit signature. 105 121 IPR030475 -
Fli2g01949 329 Pfam Ribonucleotide reductase, small chain 16 282 IPR000358 GO:0009263(InterPro)
Fli2g01949 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 7 329 IPR000358 GO:0009263(InterPro)
Fli2g01949 329 Gene3D Ribonucleotide Reductase, subunit A 3 307 IPR012348 GO:0016491(InterPro)
Fli2g01949 329 SUPERFAMILY Ferritin-like 4 307 IPR009078 -
Fli2g01949 329 CDD RNRR2 17 291 IPR033909 GO:0009263(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli2g01949 K10808 ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
Fli2g01949 K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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Event-related genes

Select Gene_1 Gene_2 Event_name
391315 Fli12g00970 Fli2g01949
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr15:9545397 Fli2g01949 Fli-Chr2:35679409 transposed
Fli Fli-Chr12:52483024 Fli2g01949 Fli-Chr2:35679409 wgd