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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli3g00582 ATGGTGTACATTCTATCATGGGACGATTTCGTCGAAAGATCCGTTCAGTTGTTTCGCGCTAGCCCCAAAAAGACTCGTTATGTGATGAAGTACAGACACTCTGATGGTAAATTGGTCCTCAAGGTTACCGATGACAAAGAGTGTCTCAAGTTTAAAACAGATCAGGCACAAGATGCTAAAAAGATGGAGAAGCTCAACAACATATTCTTCACCCTCATGGCACGTGGCCCTGAAACTGATATAACAGAAGTTACAGGAAAAGAACAAACAGCACAGCCTCCCAAAAGAGGAAGGGGAAGGAAGCAATAA 309 43.04 MVYILSWDDFVERSVQLFRASPKKTRYVMKYRHSDGKLVLKVTDDKECLKFKTDQAQDAKKMEKLNNIFFTLMARGPETDITEVTGKEQTAQPPKRGRGRKQ 102
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli3g00582 102 Gene3D Signal recognition particle alu RNA binding heterodimer, srp9-1 2 85 IPR009018 GO:0006614(InterPro)|GO:0008312(InterPro)|GO:0048500(InterPro)
Fli3g00582 102 MobiDBLite consensus disorder prediction 80 102 - -
Fli3g00582 102 Pfam Signal recognition particle 9 kDa protein (SRP9) 6 66 IPR039432 -
Fli3g00582 102 PIRSF SRP9 1 95 IPR008832 GO:0006614(InterPro)|GO:0008312(InterPro)|GO:0045900(InterPro)|GO:0048500(InterPro)
Fli3g00582 102 FunFam Signal recognition particle 9 kDa protein 2 82 - -
Fli3g00582 102 PANTHER SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN 1 102 IPR039914 GO:0005786(PANTHER)|GO:0006614(InterPro)|GO:0006614(PANTHER)|GO:0048500(InterPro)
Fli3g00582 102 SUPERFAMILY Signal recognition particle alu RNA binding heterodimer, SRP9-14 6 79 IPR009018 GO:0006614(InterPro)|GO:0008312(InterPro)|GO:0048500(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli3g00582 K03109 signal recognition particle subunit SRP9