AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fli3g00632 | ATGGCTTCTTTGTCAAAGGCAGACTCCAGACGCATGTATTCTTGGTGGTGGAACAGTCACATCAGCCCTAAGAATTCAAAATGGCTTCAAGAAAATCTTACAGATGTGGATATCAAAGTGAAAGCAATGATAAAGCTCATTGAAGAAGATGCTGATTCATTTGCTAGAAGGGCAGAAATGTACTACAAAAAGCGACCCGAGCTTATGAAACTGGTTGAAGAGTTATACAGAGCATATCGGGCGTTAGCTGAAAGATATGATCATGCAACCGGGGCCCTCCGCCAGGCCCACAAAACAATGACTGAAGCTTTCCCAAATCAAGTTCCTGCAGGGTGTGATGACTCAGCACCTAATACTCCCTATGATTCTGATTTTCAAACACCAGATTCAAGGACTACCACCATTTCATGTTTTGACCCTGATGACTCGCTGAAAGAGGGATCAACAGGAACAGCAAGAAAAGCCCTTAATTTCAGTGATTCAGAAGATATCAATAGTAATAAAAACGGGACACGTGATCATAACGTATCTCAGTTTGATAATGTAGGTGTGAATGATAAAGAGATCTTATTATTAAAAGAAGCTCTAGCCAAATTAGAAGATGAAAAAGAAGCTGGATTAAGGCAGTACATCGAGAGTTTGGATAAACTATCCAAACTCGAGTCTGAGATCCTAAAATCACAAGAAGAATCTAAAGAACTTGCCGACCGTGCAAGTAGAGCTGAGGCTGAATCCCAAAACTTGAAAGACATGCTGCAAAAATTAGAAGCTGAAAAGGAGGAAAGTCTTGACCTTTACCATCAGGCCCAAAAGAAAATTGAGGAAATTAATGAGCAAAATTTGAAGGAAGAAATCAGTAGATTAAAAGATGAAAGAGATGCTGCTTATGATCAGTATAAACAATCTTTGAATCTCATATCAGATTTGGAAAAGAAATTACTAGAAGCAGAGAAGGAAATTGAAACGTTGAAACTAGCAATTGCTAAATTAACCGAAGAGAAAGAAGCACAAACTATTTTATACCAGAAATGCATGGAGACTATTTCGAGTCTTGAACTTAGACTTGTTTGTGCTCAAGAAGAAACCGAAAGACTGAAAACTGAAATTGATAATGGAGTTTTACTTTTAAAGGGTGCAGAAGAACAACGATTAATGCTAGAAAAGTCAAACCAGTGTCTTCACATGGAATTGGAGTCAATGGGGGTCAAAATCGAGAGTCAAAATCAAGAAATTACCGAAAAACAGAAGGAATTGGGGAGGTTATGGACCTCTATACAAGAAGAGCGGTTACGGTTCGTGGAGGCTGAAACCGCTTTTCAAACTTTGCAACAATTACACACGCAGTCTCAAGAAGAATTAAGATCAATGGCAGGAGAATTACAAAACAGGGCCCAGATCTTACGGGAGATTGAAACTCGAAATGAAGTTTTAGAAGGAGAAATACAGAAGCAAATCGAGGAGAACAAGAATCTTAACATGCTCAACTTATCTTCTGGCATTACATTGAAAGAAATGCAAGCGGAGATCAGCAACTTAAAAGAAGTCAATGGGAAGCTCGAGGAGGAGGTTGACCTTCGAGTTGACCAGAGAAATGCTCTTCAGCAAGAAATATACTGTTTAAAAGAGGAACTAAATGAAATTAACAAGAAGCATGGATCAATTTTGGAGCAAGTTGCTTACATTGGGTTGAACCCGGAAAGCTTTGGGTCATCTGTGAAGGAGTTGCAAGATGAAAACATTAATTTGAAAAAAGAATGGCAAACAGAAAAAACTGCAAAAGAAGCATTGCTGGAGAAATTGGAAATTATGGGTCAACTTCTTGAGAGAAATGTTGTTTTGGAGAATTCGTTATCGGATTTGGGTGCTGAATTAGAAGGGGTAAGGGGTAAATTAAAGTCACTTGAAGAATCTTATCAATCTCTTTCAAAAGAAAAATCTAACATTGTTGTCGAAAAGGCGAATTTATTAGGCCAGTTACAAGTAACAACTGATAATTTGAGTCAAGTTTCAGAGAAAAACACTGTTCTCGAGAATTCCCTTTTTGATGCTCATGTCAAACTTGAAATCTTGAAGCAAAAGTCAAAGAGTTTTGAAGAGTCATGCCAATTGCTTGCTGATGAAAAGTCTGCACTTATTAGTGAAAAGGGTACTCTAGTCTCACAGATGGAAGTTACTGAAAGAACCTTAAAGGATCTGGAGATGAAGTACACAGATTTAGAGGAGAGGTATTCATTAATGGAGAAAGAAAGAGAATCTACACTTCAAAAAGTAGAAGAGTTGAATGTATCATTGGCTTTACAAAATCAAGAACATGTTATTTTTGCCCAAAAGAATGGCAAACAATTGCATGCCCTGAGAAGCCAAATTCAACTTCTGCAAGAAGAAAGTCAGAATAAAAACAAAGAATTTGAAGAAGAATTAGATAAAGCTTTTGGTTCTGAAATGAAAATCTTCATCTTGTTGAAATGTATACAAGATCTTGAAGAAAATAACCTCTCTCTGTTCAATGATTATCATAAAATCCAAGAAGCATTAAAGTTGTCCGAAAGTCTGATTCATGTGTTGAAGCTAGAGAAAACTGAAAACTACATAAAGATTAAATCTTTATCTGATCAAAACAATAGATTGAAGAACGGGATGTATCAGTTGTTGAAATTTGCTGGTCTTTCTTTACACCTGGGATCTGAAAACGGGCAGGAGCAAACTTGTTTCGATAGCATACAGAAAACATTTGAAGGTACAAACTGTGCCCTGATTGAAAATGAAGAAAAGAACATGAAGTTAGTTGTTGAGGTATCGATTCTAGTAACACTTTTGAGGCAACTCAAAACAGAACTGACGAATCTTGAGGTGGAAAAGGGTGTTATTCAACAAGAGTTGTATGTTCAGGCTGAAAAGATCCTCGGGTTGCAAAATGAGGCGCATAAAATTTCAGAAGTGAATGAGGGGTTGAGAAGTAAAGTGATTGAAGGAGAGATTAATGAATCAGGGCTAAGAACTCAGCTAGAGAATATACAGTGTGAGTTGTCAACTGTTCAAGAAGCTTTCAGAACATTACAGATGGAGAATTCGGTGGTTCTTGAAGAAAAGAAATCTTTGTTGGAAGATAACTACCATATCAAGAACAAGATTAGCGCAACGGAAGAGGAAAAGGAAATTATTTTGACAGAGGCTTTAAGTCAAAGTATTTTCTCTCAAACTTTGAAGACTTGCATTGATGAGAAACATGAAGAAATGTCTATGATTGAGAAGAAGTTGGAAGAGGTGGGAAAGGAAAACAATGATCTTAAAAAGACTTTGGAGAAATCTGAACATGATTTGGGAACAGTTATATCTGTTCGCGATCAATTAAAATCAGATTTACTAAATGGAAGTAATTTGCTGCAATTAAAAGAGAAGGAATATAAGGAAGCAGTCCAACAAATAATGATCTTAGAGAAAGACAAGAAGGAGTTGTCTGAGATTGTATCCGATTTGCAGAGAGAAAACAATGACATTAAAATGACAAAAGATCAACAAAGGGAACAGATTCTCAAACTTCTACGAGATAATGATCATTTGAGTAAAGAAAAGCAGATTGGGGAGGTTAAATTGCAGCAACTGACAGAAAATCAAGAAAAAACAGAGGAAAAGCTTCGATTCATGGAGACAGAAGAAGCGTTGATTCATGGTGATTTGCAGACTTCCAACGTTTATCAAACTTTATTGGAAGAGAAGATCCATGAACTTACTGAAGCTTGTTTGAATCTTCAAGAAGAAAATAACTCCAAAGATGTGAATAATGAACTGCTTAAAGAAAAAACGAACACTTTGGAATGTGAGAATGGAGATCTTAAAGCTCGTTTAGCTGCTTATGGTACGGCCCTTGAATCTTTGAAGGATAGCATCTTATCCTTGGAAGATCATACATGTATCAGAAGCAAAGTCCCGGAGTCTGATACTGAGGCGACCAAGGATGGTGAATCTGAAACCATGGAGCGAGATGAGTTCGTTGAGTTGCAGGATCTTCAAAGTAAGGTTAAAGTTATTGAAATGGCAGTAGTCGAAATGCAACTGCGCTCAACGCAACAGAAGTTAGATTCAGATGAAAAGCTGGAAACTGCAATGAAACAGATTGAAGAACTGAGTTCTCAAAAGAATCCCCGAAAGCCAAACGGTAAACCCAAGTCAAGATCAGAAATCTCCGAAGCAGACCCGAAAGATATCATGCTGGATGAAGCCTCTGAATGTTCATCATACGGTGTTAGCAAAAGAGGAACGACCGAAGGTGAGATTTGGGAGACCACAAATGATTCCAAAACTATGTTCAGACACAATCCAACCGCTTCAGATGTGTCCATTGATAACATAGTGGATAAGCTAGAAGTTTCTAGAAGATTCAAGGGGCCCCGTGATGATGAAAACAAGAGGAAAGTTCTAGAACGCCTGAACTCTGATGTTCTAAAGCTAACCAACCTTCAGATCACAATCGAGGATCTGAAAAGGAAAGTCGAGATTACATTACAGAGCAGAAGGGGAAAGGCAATGCTCGAATGTGAGACACTAAAGGGCCAACTCATGGAAGCTGAATCAGCTATCCAGAAACTATACGAGCTGAACGGGAAATTTGTAAAGCAAATAGAAGGTATCGACGACGATGGAGAAAGTGAAAGTATGAAAAGGAGAAAGGTGTCTGAACAAGCAAGAAGGGTGTCAGAAAAGATCGGTCGGTTGCAGTTAGAGATACAAAAGATACAGTTTGTGTTGTTGAAACTCGATGAAAACGATGCAGCAGGAAAGACGAGGTTTTTGGACGGTGATAAACGGGTTCTTTTGAAAGATTATCTTTACGGCGGCGGAAGAACAAAAGCGACTGTTAGCAGCAGGCGGAAGAAAGGTCATTTCTGTGCGTGTGTCGAGCCTTCGACTAAAGGCGATTGA | 4920 | 38.15 | MASLSKADSRRMYSWWWNSHISPKNSKWLQENLTDVDIKVKAMIKLIEEDADSFARRAEMYYKKRPELMKLVEELYRAYRALAERYDHATGALRQAHKTMTEAFPNQVPAGCDDSAPNTPYDSDFQTPDSRTTTISCFDPDDSLKEGSTGTARKALNFSDSEDINSNKNGTRDHNVSQFDNVGVNDKEILLLKEALAKLEDEKEAGLRQYIESLDKLSKLESEILKSQEESKELADRASRAEAESQNLKDMLQKLEAEKEESLDLYHQAQKKIEEINEQNLKEEISRLKDERDAAYDQYKQSLNLISDLEKKLLEAEKEIETLKLAIAKLTEEKEAQTILYQKCMETISSLELRLVCAQEETERLKTEIDNGVLLLKGAEEQRLMLEKSNQCLHMELESMGVKIESQNQEITEKQKELGRLWTSIQEERLRFVEAETAFQTLQQLHTQSQEELRSMAGELQNRAQILREIETRNEVLEGEIQKQIEENKNLNMLNLSSGITLKEMQAEISNLKEVNGKLEEEVDLRVDQRNALQQEIYCLKEELNEINKKHGSILEQVAYIGLNPESFGSSVKELQDENINLKKEWQTEKTAKEALLEKLEIMGQLLERNVVLENSLSDLGAELEGVRGKLKSLEESYQSLSKEKSNIVVEKANLLGQLQVTTDNLSQVSEKNTVLENSLFDAHVKLEILKQKSKSFEESCQLLADEKSALISEKGTLVSQMEVTERTLKDLEMKYTDLEERYSLMEKERESTLQKVEELNVSLALQNQEHVIFAQKNGKQLHALRSQIQLLQEESQNKNKEFEEELDKAFGSEMKIFILLKCIQDLEENNLSLFNDYHKIQEALKLSESLIHVLKLEKTENYIKIKSLSDQNNRLKNGMYQLLKFAGLSLHLGSENGQEQTCFDSIQKTFEGTNCALIENEEKNMKLVVEVSILVTLLRQLKTELTNLEVEKGVIQQELYVQAEKILGLQNEAHKISEVNEGLRSKVIEGEINESGLRTQLENIQCELSTVQEAFRTLQMENSVVLEEKKSLLEDNYHIKNKISATEEEKEIILTEALSQSIFSQTLKTCIDEKHEEMSMIEKKLEEVGKENNDLKKTLEKSEHDLGTVISVRDQLKSDLLNGSNLLQLKEKEYKEAVQQIMILEKDKKELSEIVSDLQRENNDIKMTKDQQREQILKLLRDNDHLSKEKQIGEVKLQQLTENQEKTEEKLRFMETEEALIHGDLQTSNVYQTLLEEKIHELTEACLNLQEENNSKDVNNELLKEKTNTLECENGDLKARLAAYGTALESLKDSILSLEDHTCIRSKVPESDTEATKDGESETMERDEFVELQDLQSKVKVIEMAVVEMQLRSTQQKLDSDEKLETAMKQIEELSSQKNPRKPNGKPKSRSEISEADPKDIMLDEASECSSYGVSKRGTTEGEIWETTNDSKTMFRHNPTASDVSIDNIVDKLEVSRRFKGPRDDENKRKVLERLNSDVLKLTNLQITIEDLKRKVEITLQSRRGKAMLECETLKGQLMEAESAIQKLYELNGKFVKQIEGIDDDGESESMKRRKVSEQARRVSEKIGRLQLEIQKIQFVLLKLDENDAAGKTRFLDGDKRVLLKDYLYGGGRTKATVSSRRKKGHFCACVEPSTKGD | 1639 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fli3g00632 | 1639 | Coils | Coil | 1333 | 1353 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 1261 | 1281 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 467 | 494 | - | - | |
| Fli3g00632 | 1639 | Pfam | KIP1-like protein | 14 | 87 | IPR011684 | GO:0003779(InterPro) | |
| Fli3g00632 | 1639 | Coils | Coil | 932 | 959 | - | - | |
| Fli3g00632 | 1639 | ProSiteProfiles | Networked (NET) actin-binding (NAB) domain profile. | 13 | 93 | IPR011684 | GO:0003779(InterPro) | |
| Fli3g00632 | 1639 | Coils | Coil | 824 | 844 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 583 | 603 | - | - | |
| Fli3g00632 | 1639 | MobiDBLite | consensus disorder prediction | 124 | 139 | - | - | |
| Fli3g00632 | 1639 | MobiDBLite | consensus disorder prediction | 1308 | 1327 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 1358 | 1378 | - | - | |
| Fli3g00632 | 1639 | MobiDBLite | consensus disorder prediction | 124 | 178 | - | - | |
| Fli3g00632 | 1639 | PANTHER | PROTEIN NETWORKED 4A | 279 | 959 | IPR051861 | - | |
| Fli3g00632 | 1639 | Coils | Coil | 530 | 550 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 1128 | 1218 | - | - | |
| Fli3g00632 | 1639 | MobiDBLite | consensus disorder prediction | 1373 | 1419 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 1233 | 1253 | - | - | |
| Fli3g00632 | 1639 | MobiDBLite | consensus disorder prediction | 1386 | 1405 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 1002 | 1022 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 397 | 417 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 1483 | 1503 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 687 | 707 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 1072 | 1106 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 722 | 756 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 1512 | 1532 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 189 | 209 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 617 | 651 | - | - | |
| Fli3g00632 | 1639 | MobiDBLite | consensus disorder prediction | 150 | 178 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 217 | 368 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 775 | 809 | - | - | |
| Fli3g00632 | 1639 | Coils | Coil | 502 | 522 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fli3g00632 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 88705 | Fli3g00632 | Fli5g02320 | |
| 392400 | Fli3g00632 | Fli9g01449 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fli | Fli-Chr3:6920628 | Fli3g00632 | Fli-Chr3:16480086 | dispersed | |
| Fli | Fli-Chr3:16480086 | Fli5g02320 | Fli-Chr5:89156810 | dispersed | |
| Fli | Fli-Chr9:72612946 | Fli3g00632 | Fli-Chr3:16480086 | transposed | |
| Fli | Fli-Chr5:2675435 | Fli3g00632 | Fli-Chr3:16480086 | transposed | |
| Fli | Fli-Chr3:16480086 | Fli9g01448 | Fli-Chr9:72609175 | wgd |