AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli3g00674 ATGGAGTCACCTCACGCACCCATGCGATCAATCAAGCTGTGGCCACCAAGCCACACAACACGGGTCCTGCTCGTTAATCGAATCGTAAAATGCTTCACAACCCCATCAATTTTGACAAGAAAGTACGGTCTTTTAAGCAAAGAAGAAGCAGAGGAAGAAGCTAAACAAATCGAATCTGCAGGCTTTATTGCAGCATCCCAACAATTCGAAAAAGACCCCGAAAGCGACGGTGGATCCGCTGTTCAAGTTTACGCGAAAGAATCGAGTAAATTGATGGTGGAATTCATCAAAACAGGGCCCAAACCGAAGGAATCCATGCCCGAATTGATCAAATCGGATCATGTTTTCGATATTTCAGGCGGTCGTCGGGCGTTTATCGAAGCTGAAGAGGCTAAAGAGCTGTTGAAACCTTTGAAAGAGCCCGGAAACAAGTTTACAAAGATATGTTTTAGTAACCGAAGTTTCGGGTTGCCTGCAGCCCATGTCGCTGCATCGGTGTTATCGGGGGTTAAAGATCAGTTAACCGAGGTTGATTTATCGGACATTGTATCGAGGAGGCCCGAGCCTGAAGCCATTGAGGTTATTAAGATGTTTGCATGGGCTCTTGAGGGTTGTAAGTTGAGTTATTTGAATTTGTCTAACAATGTGTTGAATGAGAAAGGGGTTAGGGCATTTGGGGATCTTTTGAGGTCTCAAGGTGGTCTTGTGGAGTTGTATTTGATGAATGCTGGGATCTCGCCCGAAGCCGCGAAGGCGGTTTGCGAGTTGGTTCGGGCGACTGAGAAACTTAAGGTTTTTCATTTTCATCATAATAGGATGGGAGACGAAGGCGCGATCGCCATTTCTCAACTCGTGAAAGGATCCCCGAGCCTAGAGGATTTCAGGTGTTCATCAACACGAGTCGGGTCAGCAGGGGGGATCGCACTAGCCGAAGCATTGAAAACTTGTACACTTTTGAAGAAACTTGACTTACGTGACAACATGTTCGGATCAAAAGCCGGGGTTGCATTGAGTAATAACCTATCCACACACGCTAATCTCACGGAAATTTACCTTAGTTACTTGAATTTGGAAGACGAAGGAACTATCGCGATAGTGAATGCTCTAAAAACCTCCAAATCACCCCTCGAAGTCATCGAGATGGCCGGAAACAACATTACTTTCGAAGCGGCAAAAGGTTTAGCTGATTGCATGGTTTCAAAGAAACATTCTCTAACCAAAATAAACTTATCCGAGAATGAACTAAAGAACGAAGGAGCCATCGCGATCGGGAAGGCGCTCGAAGATAATTTTGAACGATTGTGCATCGTTAATTTGAGTGCAAACAAGATCAAATTAGATGGAGCTATGTCGTTGTCTAAAGCAGTTGTCGGAAAATTAGGGTTTCGACTGCTTAATATTAATGGAAACTATTTATCTGATAAAGGGATAGAGGGTGTTAGAGAGATCTTCAAGGACTTTCCTCGTATGCTCGGACCTCTTGATGAGAATGATCCTCATGGTGAAGATGGTCACGATAAAAGTGGTCATGATAGTGTCAATGGACTTGAATCGAGTAATAAATAA 1566 44.06 MESPHAPMRSIKLWPPSHTTRVLLVNRIVKCFTTPSILTRKYGLLSKEEAEEEAKQIESAGFIAASQQFEKDPESDGGSAVQVYAKESSKLMVEFIKTGPKPKESMPELIKSDHVFDISGGRRAFIEAEEAKELLKPLKEPGNKFTKICFSNRSFGLPAAHVAASVLSGVKDQLTEVDLSDIVSRRPEPEAIEVIKMFAWALEGCKLSYLNLSNNVLNEKGVRAFGDLLRSQGGLVELYLMNAGISPEAAKAVCELVRATEKLKVFHFHHNRMGDEGAIAISQLVKGSPSLEDFRCSSTRVGSAGGIALAEALKTCTLLKKLDLRDNMFGSKAGVALSNNLSTHANLTEIYLSYLNLEDEGTIAIVNALKTSKSPLEVIEMAGNNITFEAAKGLADCMVSKKHSLTKINLSENELKNEGAIAIGKALEDNFERLCIVNLSANKIKLDGAMSLSKAVVGKLGFRLLNINGNYLSDKGIEGVREIFKDFPRMLGPLDENDPHGEDGHDKSGHDSVNGLESSNK 521
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli3g00674 521 Gene3D Ribonuclease Inhibitor 107 496 IPR032675 -
Fli3g00674 521 Pfam Leucine Rich repeat 316 338 IPR001611 GO:0005515(InterPro)
Fli3g00674 521 Pfam Leucine Rich repeat 402 423 IPR001611 GO:0005515(InterPro)
Fli3g00674 521 Pfam Leucine Rich repeat 205 225 IPR001611 GO:0005515(InterPro)
Fli3g00674 521 Pfam Leucine Rich repeat 262 282 IPR001611 GO:0005515(InterPro)
Fli3g00674 521 SUPERFAMILY RNI-like 125 500 - -
Fli3g00674 521 Pfam WPP domain 10 104 IPR025265 -
Fli3g00674 521 SMART LRR-RI-2 316 343 - -
Fli3g00674 521 SMART LRR-RI-2 288 315 - -
Fli3g00674 521 SMART LRR-RI-2 459 486 - -
Fli3g00674 521 SMART LRR-RI-2 431 458 - -
Fli3g00674 521 SMART LRR-RI-2 373 400 - -
Fli3g00674 521 SMART LRR-RI-2 402 429 - -
Fli3g00674 521 SMART LRR-RI-2 344 371 - -
Fli3g00674 521 SMART LRR-RI-2 232 259 - -
Fli3g00674 521 SMART LRR-RI-2 204 231 - -
Fli3g00674 521 SMART LRR-RI-2 260 287 - -
Fli3g00674 521 MobiDBLite consensus disorder prediction 491 521 - -
Fli3g00674 521 PANTHER RAN GTPASE-ACTIVATING PROTEIN 1 6 510 IPR045203 GO:0005096(InterPro)
Fli3g00674 521 Gene3D WPP domain 10 106 IPR038214 -
Fli3g00674 521 MobiDBLite consensus disorder prediction 491 512 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli3g00674 K14319 Ran GTPase-activating protein 1
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Event-related genes

Select Gene_1 Gene_2 Event_name
88456 Fli1g02572 Fli3g00674
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr1:110194961 Fli3g00674 Fli-Chr3:17689950 wgd