Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fli3g00681 | ATGTCGCCGGCAGCCGGCGTTTCTACGGTGGCCGATCGAGTGCCGGTGGTGATGCCGGCGACCGCGGCGGTGATGCCGGAGGCATTCGCTAAGGACGCGATAATCTCGTGGTTCAGAGGCGAGTTCGCGGCGGCGAACGCCATCATTGATGCGTTGTGTAGCCATTTGTCGCAGTTTGGAGGCGGAAAAAGCGAGTATGAATCGGTGTTTGCCGCCATACATCGACGCCGGTTGAATTGGATCCCGATTCTGCAGATGCAGAAGTATTTCTCGATCGCTGATGTGGCTTTGGAGCTTCAGAAAGTGACCGAAATGAAGGTGAAATCAATCGGCGTTGAGAAGATCGTTGACGAAAACGCTAATCCTCCGGCGCCGGAGACGGCGCCGGAGACGGTGCCGGAGACGGTGACGGAGACGAAACGTGAAGTTTTGATTGAGGAATCTGTTGATATCAATGGAGACGACGGTGGTGAGGTGGTTGTTGATGATGATTCCACTAAGGATAACAATTCGCCGAAGAGCGGGATCACAGATGCAGGATTACAGGAAGTGCATCCAACGGTAGAAAGCCCTGAGATATGCCCAAGCGAAGAAGATTGGGAGGCCCGGCGTGCTGAAATCAAGATGACAAAAGGATTCATAGCCAAGGAGTCTGTAAAAGGACATATGGTGAATGTCGTGAGAGGTTTGAAGTTGTATGAGGACATACTCAACAACGACGAGCTATCTAAGTTGACTGAATATGTAACTGAACTCCGAGTTGCTGGCCAAAATGGTGAACTCTCAGGTGAGACATTTATAATGTACAACCAGCAGTCGAAGGCAATCAAAAGAGAGCTACTTCAGTTTGGAGCCCCTATTTTTGGACAGATAAAAGATGAAGCTACAAATAATAAGTCCCAAGATAGCAATATAGAGCCAATTCCTGCTCCTCTTGAAGGTGTCATAGACCATCTAATTCAATTTCGCCTAATTTCTGAAAATCGACGACCAAACAGTTGCATTATAAACTTTTTCGATGAGGGGGAGTTTTCACAGCCTTTCTTGAAACCACCTCATCTAGAGCAACCCATCTCCACACTTGTTCTGTCTGAATCAACAATGGCTTTTGGGCGCACACTAGTATGTGATAATGATGGAAACTATAAAGGACCACTCATGCTTTCTCTCAAGGAAGGGTCACTCATAGTGATGAGAGGAAACAGCGCTGACATGGCACGCCACGTCATGTGTCAATCACCAACTAAACGAATCAGCGTCTCGTTTTTCAAAGTCCGAATAGACACCTACACCAAAAATCCACCACCTAAAGATCTTATGGCTGGTGCCATGACCGTATGGCAGCCAAGTCTAACAACTCCATTGATCACACCAACAACTGGACCACTCGACGGGTATGACTCGATCCACATTCTCCCCAAATGGGGCACAATCCGTGCCCCACAACTGCTTATGTTAGCACCAGTCCGTCCAATGGTCATGAGCCCTAGAAGGCTGCCACGTGGCGGGACTGGTGTTTTCTTACCATGGAATGGTGGGTCAAAAAAATCAGCCAAGCATCTCCCACCTCGTGCTCAAAGAGGGCGTCTTCTTGCACTACACGCCTCAACCGAACCACACAAAATCGATCGAACCCCTGAATCCCCAATAAGTGTGACTTGA | 1662 | 48.68 | MSPAAGVSTVADRVPVVMPATAAVMPEAFAKDAIISWFRGEFAAANAIIDALCSHLSQFGGGKSEYESVFAAIHRRRLNWIPILQMQKYFSIADVALELQKVTEMKVKSIGVEKIVDENANPPAPETAPETVPETVTETKREVLIEESVDINGDDGGEVVVDDDSTKDNNSPKSGITDAGLQEVHPTVESPEICPSEEDWEARRAEIKMTKGFIAKESVKGHMVNVVRGLKLYEDILNNDELSKLTEYVTELRVAGQNGELSGETFIMYNQQSKAIKRELLQFGAPIFGQIKDEATNNKSQDSNIEPIPAPLEGVIDHLIQFRLISENRRPNSCIINFFDEGEFSQPFLKPPHLEQPISTLVLSESTMAFGRTLVCDNDGNYKGPLMLSLKEGSLIVMRGNSADMARHVMCQSPTKRISVSFFKVRIDTYTKNPPPKDLMAGAMTVWQPSLTTPLITPTTGPLDGYDSIHILPKWGTIRAPQLLMLAPVRPMVMSPRRLPRGGTGVFLPWNGGSKKSAKHLPPRAQRGRLLALHASTEPHKIDRTPESPISVT | 553 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fli3g00681 | 553 | MobiDBLite | consensus disorder prediction | 118 | 137 | - | - | |
| Fli3g00681 | 553 | MobiDBLite | consensus disorder prediction | 533 | 553 | - | - | |
| Fli3g00681 | 553 | Gene3D | - | 214 | 430 | IPR037151 | - | |
| Fli3g00681 | 553 | MobiDBLite | consensus disorder prediction | 154 | 178 | - | - | |
| Fli3g00681 | 553 | PANTHER | HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED | 28 | 538 | IPR044842 | GO:0003729(InterPro)|GO:0006402(InterPro)|GO:0032451(InterPro) | |
| Fli3g00681 | 553 | SUPERFAMILY | Clavaminate synthase-like | 222 | 422 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fli3g00681 | K10767 | mRNA N6-methyladenine demethylase [EC:1.14.11.53] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 392406 | Fli3g00681 | Fli9g01432 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fli | Fli-Chr1:110698040 | Fli3g00681 | Fli-Chr3:18138922 | dispersed | |
| Fli | Fli-Chr1:110905676 | Fli3g00681 | Fli-Chr3:18138922 | wgd | |
| Fli | Fli-Chr10:26650892 | Fli3g00681 | Fli-Chr3:18138922 | wgd | |
| Fli | Fli-Chr3:18138922 | Fli9g01432 | Fli-Chr9:72267098 | wgd |