AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli3g00681 ATGTCGCCGGCAGCCGGCGTTTCTACGGTGGCCGATCGAGTGCCGGTGGTGATGCCGGCGACCGCGGCGGTGATGCCGGAGGCATTCGCTAAGGACGCGATAATCTCGTGGTTCAGAGGCGAGTTCGCGGCGGCGAACGCCATCATTGATGCGTTGTGTAGCCATTTGTCGCAGTTTGGAGGCGGAAAAAGCGAGTATGAATCGGTGTTTGCCGCCATACATCGACGCCGGTTGAATTGGATCCCGATTCTGCAGATGCAGAAGTATTTCTCGATCGCTGATGTGGCTTTGGAGCTTCAGAAAGTGACCGAAATGAAGGTGAAATCAATCGGCGTTGAGAAGATCGTTGACGAAAACGCTAATCCTCCGGCGCCGGAGACGGCGCCGGAGACGGTGCCGGAGACGGTGACGGAGACGAAACGTGAAGTTTTGATTGAGGAATCTGTTGATATCAATGGAGACGACGGTGGTGAGGTGGTTGTTGATGATGATTCCACTAAGGATAACAATTCGCCGAAGAGCGGGATCACAGATGCAGGATTACAGGAAGTGCATCCAACGGTAGAAAGCCCTGAGATATGCCCAAGCGAAGAAGATTGGGAGGCCCGGCGTGCTGAAATCAAGATGACAAAAGGATTCATAGCCAAGGAGTCTGTAAAAGGACATATGGTGAATGTCGTGAGAGGTTTGAAGTTGTATGAGGACATACTCAACAACGACGAGCTATCTAAGTTGACTGAATATGTAACTGAACTCCGAGTTGCTGGCCAAAATGGTGAACTCTCAGGTGAGACATTTATAATGTACAACCAGCAGTCGAAGGCAATCAAAAGAGAGCTACTTCAGTTTGGAGCCCCTATTTTTGGACAGATAAAAGATGAAGCTACAAATAATAAGTCCCAAGATAGCAATATAGAGCCAATTCCTGCTCCTCTTGAAGGTGTCATAGACCATCTAATTCAATTTCGCCTAATTTCTGAAAATCGACGACCAAACAGTTGCATTATAAACTTTTTCGATGAGGGGGAGTTTTCACAGCCTTTCTTGAAACCACCTCATCTAGAGCAACCCATCTCCACACTTGTTCTGTCTGAATCAACAATGGCTTTTGGGCGCACACTAGTATGTGATAATGATGGAAACTATAAAGGACCACTCATGCTTTCTCTCAAGGAAGGGTCACTCATAGTGATGAGAGGAAACAGCGCTGACATGGCACGCCACGTCATGTGTCAATCACCAACTAAACGAATCAGCGTCTCGTTTTTCAAAGTCCGAATAGACACCTACACCAAAAATCCACCACCTAAAGATCTTATGGCTGGTGCCATGACCGTATGGCAGCCAAGTCTAACAACTCCATTGATCACACCAACAACTGGACCACTCGACGGGTATGACTCGATCCACATTCTCCCCAAATGGGGCACAATCCGTGCCCCACAACTGCTTATGTTAGCACCAGTCCGTCCAATGGTCATGAGCCCTAGAAGGCTGCCACGTGGCGGGACTGGTGTTTTCTTACCATGGAATGGTGGGTCAAAAAAATCAGCCAAGCATCTCCCACCTCGTGCTCAAAGAGGGCGTCTTCTTGCACTACACGCCTCAACCGAACCACACAAAATCGATCGAACCCCTGAATCCCCAATAAGTGTGACTTGA 1662 48.68 MSPAAGVSTVADRVPVVMPATAAVMPEAFAKDAIISWFRGEFAAANAIIDALCSHLSQFGGGKSEYESVFAAIHRRRLNWIPILQMQKYFSIADVALELQKVTEMKVKSIGVEKIVDENANPPAPETAPETVPETVTETKREVLIEESVDINGDDGGEVVVDDDSTKDNNSPKSGITDAGLQEVHPTVESPEICPSEEDWEARRAEIKMTKGFIAKESVKGHMVNVVRGLKLYEDILNNDELSKLTEYVTELRVAGQNGELSGETFIMYNQQSKAIKRELLQFGAPIFGQIKDEATNNKSQDSNIEPIPAPLEGVIDHLIQFRLISENRRPNSCIINFFDEGEFSQPFLKPPHLEQPISTLVLSESTMAFGRTLVCDNDGNYKGPLMLSLKEGSLIVMRGNSADMARHVMCQSPTKRISVSFFKVRIDTYTKNPPPKDLMAGAMTVWQPSLTTPLITPTTGPLDGYDSIHILPKWGTIRAPQLLMLAPVRPMVMSPRRLPRGGTGVFLPWNGGSKKSAKHLPPRAQRGRLLALHASTEPHKIDRTPESPISVT 553
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli3g00681 553 MobiDBLite consensus disorder prediction 118 137 - -
Fli3g00681 553 MobiDBLite consensus disorder prediction 533 553 - -
Fli3g00681 553 Gene3D - 214 430 IPR037151 -
Fli3g00681 553 MobiDBLite consensus disorder prediction 154 178 - -
Fli3g00681 553 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 28 538 IPR044842 GO:0003729(InterPro)|GO:0006402(InterPro)|GO:0032451(InterPro)
Fli3g00681 553 SUPERFAMILY Clavaminate synthase-like 222 422 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli3g00681 K10767 mRNA N6-methyladenine demethylase [EC:1.14.11.53]
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
392406 Fli3g00681 Fli9g01432
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr1:110698040 Fli3g00681 Fli-Chr3:18138922 dispersed
Fli Fli-Chr1:110905676 Fli3g00681 Fli-Chr3:18138922 wgd
Fli Fli-Chr10:26650892 Fli3g00681 Fli-Chr3:18138922 wgd
Fli Fli-Chr3:18138922 Fli9g01432 Fli-Chr9:72267098 wgd