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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli3g00704 ATGGTGGACTCTAAAACGATCGAATTCTCAACGCTTTCTGGAACTTTGGCAGCCAAAAGAACACCTAATAAAAGGACTGAATGTGAACCACAAGACAGTTTCTACATAGAATTGGATATGCCAGCTGTGTTGGTTTCAGATTACAATGATCTTGAAGTTTCTACAATTTTAGAAATATTAAACGATGTTGCTGTTGTTGATGTTCTAAAGAAGAATGCTCTTGATGACATTATTGTGGTGCTTCCATCCGGAGAAGATGTTGTAGCCTTTAAGCCACAATTTAGTAAGATCAAAGAAGCTCCTGGTAGAGCGATAGTAATTACAGCACGTGCACCTAATGGGTCGGGGTTCGATTTTTATTCTCGTGTTTTCTGCCCTAAATATGGAATTGATGAGGATTCTGTTTGTGGGAGCGCCCATTGCGCCTTAGTAACCTATTGGCATGAAAAGTTAGGGAAATGTGACTTTGTTGCATATCAGGCATCACGTAGAAGTGGCATATTACATCTCCATCTCGATAAGCAACATCAAAGAGTACGCCTTCGAGGTAAAGCCACAACGGTCATGGAAGGGTATCTTTTGGTCTAA 588 40.48 MVDSKTIEFSTLSGTLAAKRTPNKRTECEPQDSFYIELDMPAVLVSDYNDLEVSTILEILNDVAVVDVLKKNALDDIIVVLPSGEDVVAFKPQFSKIKEAPGRAIVITARAPNGSGFDFYSRVFCPKYGIDEDSVCGSAHCALVTYWHEKLGKCDFVAYQASRRSGILHLHLDKQHQRVRLRGKATTVMEGYLLV 195
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli3g00704 195 PANTHER PHENAZINE BIOSYNTHESIS PROTEIN 3 195 IPR003719 GO:0003824(InterPro)|GO:0005737(PANTHER)|GO:0009058(InterPro)|GO:0016853(PANTHER)
Fli3g00704 195 SUPERFAMILY Diaminopimelate epimerase-like 68 195 - -
Fli3g00704 195 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 49 183 - -
Fli3g00704 195 Pfam Phenazine biosynthesis-like protein 2 191 IPR003719 GO:0003824(InterPro)|GO:0009058(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli3g00704 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr3:18960210 Fli3g00704 Fli-Chr3:18973576 proximal
Fli Fli-Chr3:18973576 Fli3g00705 Fli-Chr3:19060182 tandem