Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fli3g00729 | ATGGCTTATTCGTTGGAGGAGGATGTGTTGGAGCATGTATTCTCGTTCATAACGTCGCATAAAGACCGTAACGCCGTTTCGTTGGTGTGTAAGTCGTGGTTTAGGATCGAGAGGTGGTGCCGGAAGAGGATTTTCATCGGAAACTGTTACGCCGTGAGTCCGACGATCATGATCAGGAGGTTTCCGGAGGTGAGATCTGTGGAGTTGAAAGGGAAACCGCATTTTGCTGACTTCAATTTGGTGCCGGAGGGTTGGGGAGGGTATTTTTACCCCTGGATCTGTGAAATGGCTAGGGCTTATCCGGGGTTAGAGGAGATTAAGCTTAAGCGGATGGTGGTTACTGATGAGAATTTGGAGCTGATCTCGAAATCGTTTGAGAATTTTAAGGTTTGGTGTTGTCTTCTTGTGAGGGTTTCAGTACCGACGGACTTGCTGCCATTGCTGCTAATTGCAGAAATCTGA | 462 | 47.62 | MAYSLEEDVLEHVFSFITSHKDRNAVSLVCKSWFRIERWCRKRIFIGNCYAVSPTIMIRRFPEVRSVELKGKPHFADFNLVPEGWGGYFYPWICEMARAYPGLEEIKLKRMVVTDENLELISKSFENFKVWCCLLVRVSVPTDLLPLLLIAEI | 153 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fli3g00729 | 153 | PANTHER | F-BOX-TPR REPEAT PROTEIN POF3 | 5 | 122 | - | GO:0019005(PANTHER)|GO:0031146(PANTHER) | |
| Fli3g00729 | 153 | Pfam | F-box | 4 | 43 | IPR041567 | - | |
| Fli3g00729 | 153 | Gene3D | Ribonuclease Inhibitor | 42 | 141 | IPR032675 | - | |
| Fli3g00729 | 153 | FunFam | Transport inhibitor response 1 | 1 | 41 | - | - | |
| Fli3g00729 | 153 | SUPERFAMILY | F-box domain | 5 | 42 | IPR036047 | GO:0005515(InterPro) | |
| Fli3g00729 | 153 | Pfam | Transport inhibitor response 1 protein domain | 62 | 108 | IPR041101 | - | |
| Fli3g00729 | 153 | SMART | fbox-2 | 5 | 46 | IPR001810 | GO:0005515(InterPro) | |
| Fli3g00729 | 153 | Gene3D | - | 1 | 41 | - | - | |
| Fli3g00729 | 153 | CDD | F-box-AtTIR1-like | 4 | 41 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fli3g00729 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fli | Fli-Chr3:20041398 | Fli5g02379 | Fli-Chr5:91207218 | dispersed | |
| Fli | Fli-Chr3:20041398 | Fli16g01643 | Fli-Chr16:58094717 | transposed |