AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli3g00804 ATGTCTCCTCTGCAAACCCTAATCTCCATCTTCCTCATAACCTCGTCATCTATTACACTCGTCTCCTCCACCACCGCCACCGTCACCGTCGCCGCACCGACGGCGTACGAAGCACTCGAATCGTATGATTTCCCTGCGGGTCTGCTTCCGTTGGGGGTGAGGGGCTACACTCTGGACGAACAAACGGGTCAATTCGAGGTGGACATCGGTCAAACGTGCTCGTACACCGTTCAAGGGTACAATCTGAAGTACCAATCGACGATCAGCGGTGTGATTAGCAGAGATAAGTTGACCAATTTGAAGGGGGTGAGTGTTAAGGTGCTGTTCTTTTGGTTGGATATTGTGGAGGTGAGTCGCGATGGTGATCAGTTGTATCTGTCGGTGGGGGTGCTGTCCGCGGGGTTCGATATCAGTGGGTTCGTTGAGTCGCCGCAGTGTGGGTGTGGGTTCGATTGCAATGGTGTTGGTGGTTCGGTGACGGTGAGTGAGGGTGATGATGATGATAAGATGGAGTTGTGGTCTTCGTTGTGA 531 52.92 MSPLQTLISIFLITSSSITLVSSTTATVTVAAPTAYEALESYDFPAGLLPLGVRGYTLDEQTGQFEVDIGQTCSYTVQGYNLKYQSTISGVISRDKLTNLKGVSVKVLFFWLDIVEVSRDGDQLYLSVGVLSAGFDISGFVESPQCGCGFDCNGVGGSVTVSEGDDDDKMELWSSL 176
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli3g00804 176 PANTHER T31J12.3 PROTEIN-RELATED 22 147 IPR007493 -
Fli3g00804 176 Gene3D - 15 143 IPR036758 -
Fli3g00804 176 SUPERFAMILY At5g01610-like 9 152 IPR036758 -
Fli3g00804 176 Pfam Protein of unknown function, DUF538 35 140 IPR007493 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli3g00804 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
88723 Fli3g00804 Fli7g01830
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2383496 Fli Fli11g01378 Fli-Chr11:39968885 Fli3g00804 Fli-Chr3:22207162
2383883 Fli Fli12g00610 Fli-Chr12:41531888 Fli3g00804 Fli-Chr3:22207162
2388468 Fli Fli3g00319 Fli-Chr3:6124663 Fli3g00804 Fli-Chr3:22207162
2390639 Fli Fli7g00121 Fli-Chr7:3416053 Fli3g00804 Fli-Chr3:22207162
2423376 Fli Fli3g00804 Fli-Chr3:22207162 Fli7g01830 Fli-Chr7:85138626