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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli3g00878 ATGGACATCGAGAAGAAAGACGAACAACCTCTCAGATCCACCACCACCACCTCCGCCGTCGCCGGAGACTCCCCCGGCAACCGCCACCGCCGGCGACGCATCATCATCTGCTCATCGCTCATCGGAATCACACTCACCGTCGCCTTAATCATACTCATTCTAGCCCTCACCGTCTTCAAGCCCAAAAAGCCCGTTCTAACAGTGGATTCCGTATCGATTCAAGACCTTGACGTCTCCGTCAATCCGATTCCGATTCAGGTGTCGTTGAACCTCTCGCTTGCTCTCGGAATCACGATCGAGAATCGGAATAAGGTGAGTATCAGTTACAAGAGTAGCTCGTCGGAGTTACGTTACAGAGGTAAAGAGATCGGTAGCGTTCCGATTCCGGCCGGAAAACTTGGGGCGGATGATCGGACGGAGTTGAATCTGACGCTTACGGTGTTTGCTGATCGGTTGGTGTCTGATTCGGAGATCTATGGGGATGTTCTTAGAGGTAATTTGCCGATTTCTACTTACACAAGAATCAAAGCGAAAGTTCGTGTGCTGTTCTTTCATATTCATGTTACGTCTACTTCCACCTGTGATGTGAATATTGATGTGCAGTCTAGACGTGTTGGGAATCAAACGTGCCAGTATAAGAACAAAATTTAG 651 49.16 MDIEKKDEQPLRSTTTTSAVAGDSPGNRHRRRRIIICSSLIGITLTVALIILILALTVFKPKKPVLTVDSVSIQDLDVSVNPIPIQVSLNLSLALGITIENRNKVSISYKSSSSELRYRGKEIGSVPIPAGKLGADDRTELNLTLTVFADRLVSDSEIYGDVLRGNLPISTYTRIKAKVRVLFFHIHVTSTSTCDVNIDVQSRRVGNQTCQYKNKI 216
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli3g00878 216 Gene3D - 52 199 - -
Fli3g00878 216 MobiDBLite consensus disorder prediction 1 26 - -
Fli3g00878 216 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 27 203 - -
Fli3g00878 216 Pfam Late embryogenesis abundant protein 97 192 IPR004864 -
Fli3g00878 216 SUPERFAMILY LEA14-like 49 155 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli3g00878 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
392417 Fli3g00878 Fli9g01370
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2383906 Fli Fli12g00745 Fli-Chr12:45978474 Fli3g00878 Fli-Chr3:24223492
2424573 Fli Fli3g00878 Fli-Chr3:24223492 Fli9g01370 Fli-Chr9:70765539