AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli3g00882 ATGCATATGAGTCTTCAATTTCGAAGTCCAGTGAAGCTTGTTCTGGTTATTTGCTTCTTATGGTGGCCAATTGTTGAATCTCAAATATCTAATCCCCTACCGAAGCCTGCGAGGGCTCTTGATGCGACCTTACAGGACTATGCGTATCGCGCATTTATTCGTCCACGAACTGGTATTCCCTTTGATGGTATTGTCCCTCCATATTTGACTGGGATTAAGATATCAGCAATGAGGCTCAGAAGTGGTAGTCTGTATCGTAGAGGCGTGCAAAACTATAAAGAATTCGTAATTCCGGTTGGCATAAGAGAGCAACCGTATGTGGAGAGACTGGTTCTGGTCTATCAAAACTTAGGAAATTGGTCCACAACTTATTACTCTTTACCTGGTTACATTTATCTAGCTCCCGTGTTAGGTCTTCTTGCTTATAATGGTTCAGATTTGTCAGCTTCTAACCTACCAGAACTCGACTTGTGGGCTTCTGAAGAAGCCATTACAATACATTTTGGAAGAATGCGGCCGGTACCAGTTGGGTTGGTTGCAAAGTGTGCTTGGTTTGATCTAAATGGTCAGGTGAATTTCACAAATTTGTTATCTGGGAATGTATGTTCAACCACTGAACAAGGGCATTTCTCCATTGTAGCTGAATCAGCTGTCCCTCCTGTTCCAGTACCTCCTGCACCACCTCAACCTGCACAATCAAAACCTACACCTAGTAGTAGAAAGAACAACGAGGCTAGGATTTGGGGTATTATTGGCGCAGTAACTGGTGGAACCGCGTTGCTGGTGTTATTGGTGTTGTTTATATTGTGGGCGTGGCGGTACAAAAAGAGGAAAAGAATGCGTGAATTAGAAAGGGCTGCAGATGCTGGTGTAGCATTGAGGATGACCAGAATTGGGAGCATGAGAGCACCATTTGCATTGGCCACAAGAACAATGCCGAATTTTGAAAGCGACTTAGATGCTTGA 966 43.89 MHMSLQFRSPVKLVLVICFLWWPIVESQISNPLPKPARALDATLQDYAYRAFIRPRTGIPFDGIVPPYLTGIKISAMRLRSGSLYRRGVQNYKEFVIPVGIREQPYVERLVLVYQNLGNWSTTYYSLPGYIYLAPVLGLLAYNGSDLSASNLPELDLWASEEAITIHFGRMRPVPVGLVAKCAWFDLNGQVNFTNLLSGNVCSTTEQGHFSIVAESAVPPVPVPPAPPQPAQSKPTPSSRKNNEARIWGIIGAVTGGTALLVLLVLFILWAWRYKKRKRMRELERAADAGVALRMTRIGSMRAPFALATRTMPNFESDLDA 321
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli3g00882 321 Pfam Protein of unknown function (DUF1191) 36 214 IPR010605 -
Fli3g00882 321 MobiDBLite consensus disorder prediction 221 241 - -
Fli3g00882 321 PANTHER PROTEIN, PUTATIVE (DUF1191)-RELATED 14 319 IPR010605 GO:0016020(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli3g00882 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
88728 Fli3g00882 Fli7g01894
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2370487 Fli Fli3g00882 Fli-Chr3:24393014 Fli7g01535 Fli-Chr7:78360563
2384027 Fli Fli12g01315 Fli-Chr12:59792713 Fli3g00882 Fli-Chr3:24393014
2423384 Fli Fli3g00882 Fli-Chr3:24393014 Fli7g01894 Fli-Chr7:86195830