AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli3g00884 ATGTCTACAGTTGATCGTCTTCTTCAATCTAATCTCGCCGGAAACGATCGGCATTTGAATCATGTGAAGCATGTTCACGACCTCCGATTACCAAATCTCACCTCCAAAACACTCGTCGATTTCACCGGTTTTTCACTCCGATCAAAGCCGATCAAGCTAGATTTATTATCTAATCGATCGATTACTCCTTGTGCTGGTGGCGATGGTGGTGGTTCCAGTTTCCGTCACGGCGGTGACGGTGGTGGTAGTGACCGGAGCGGCGGCGGAGGCGGCGGCGGAAAGTTCGATGACTCAGGTTCGTTGGATAGTTTTGGGCCAATTGGGGCTTTTCTTAGTGGTTGGAGATCTAGGGTTGCTGCTGATCCCCAATTTCCATTCAAGGTGTTAATGGAAGAAGTGGTTGGTGTGAGTGCAAATGTGGCTGGTGACATGGCGACTCGTCCGAATTTCGGGTTAAACGAGCTCGATTTCGTGTTCTCGACACTAGTCGTCGGGTCAATCATGAATTTCACCCTAATGTATCTGTTAGCACCCCCCATGACATCCGGATCAGCAGCCCTCCCTTCGATTTTCGCCAGTTCGCCAGCGAGCCACATGTTTGAGCCTGGGGCGTACACCCTGGTTAATCGGCTAGGGACGTTTGTGTACAAAGGAACACAGTTTGCAGCCGTGGGCTTCGCAGCTGGTTTGGTTGGAACCGCATTGTCAAACGGGCTGATCAAGATACGGAAGAAGATGGACCCTAGCTTCGAGTCACCAAACAAGGCTCCACCCACTGTTTTGAACGCGATCACATGGGCGATTCATATGGGTATAAGCAGTAATCTGAGGTACCAAAGTTTGAATGGGATTGAGTTCATGCTGGCAAAAGGGTTGCCACCATTGTTGTTCAAGAGCTCAGTGATCGGGTTGAGGTTGGTGAACAACGTTCTCGGTGGAATGACGTTTGTGATGCTTGCGAGGATGACTGGATCGCAAAGCGCGAGTGGAGATGAAGACAAGATTGCTGATGAAGAGAGTTCAGATGAGGAGAAGAAGCTACTGAGCAATGAAATTGCTTCAAAGTAA 1068 49.53 MSTVDRLLQSNLAGNDRHLNHVKHVHDLRLPNLTSKTLVDFTGFSLRSKPIKLDLLSNRSITPCAGGDGGGSSFRHGGDGGGSDRSGGGGGGGKFDDSGSLDSFGPIGAFLSGWRSRVAADPQFPFKVLMEEVVGVSANVAGDMATRPNFGLNELDFVFSTLVVGSIMNFTLMYLLAPPMTSGSAALPSIFASSPASHMFEPGAYTLVNRLGTFVYKGTQFAAVGFAAGLVGTALSNGLIKIRKKMDPSFESPNKAPPTVLNAITWAIHMGISSNLRYQSLNGIEFMLAKGLPPLLFKSSVIGLRLVNNVLGGMTFVMLARMTGSQSASGDEDKIADEESSDEEKKLLSNEIASK 355
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli3g00884 355 MobiDBLite consensus disorder prediction 325 355 - -
Fli3g00884 355 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 32 328 - -
Fli3g00884 355 Pfam Protein RETICULATA-related 117 284 IPR021825 -
Fli3g00884 355 MobiDBLite consensus disorder prediction 67 95 - -
Fli3g00884 355 MobiDBLite consensus disorder prediction 331 355 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli3g00884 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
392418 Fli3g00884 Fli9g01361
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2370489 Fli Fli3g00884 Fli-Chr3:24493660 Fli9g01365 Fli-Chr9:70681647
2390404 Fli Fli6g01793 Fli-Chr6:81374257 Fli3g00884 Fli-Chr3:24493660
2424575 Fli Fli3g00884 Fli-Chr3:24493660 Fli9g01361 Fli-Chr9:70450886