Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fli3g00895 | ATGGGACTTTGCTGCTTCTCCTCGACGCCGACCGATGAAGAAGAGATCGATAGTCATCCTGAGTTTGCAGGGGGTAATGTGACTCTCATCACTACCAAGAGTGCTTGGGACCAAAAGCTGTCAGAAGCAAAGATTCAAGGCAAAGTAGTGATTGCCAACTTCAGTGCAACTTGGTGTGGTCCATGCAAATCAATTGCACCACACTACGTTGAGCTATCAGAGAAGTATCCGTCTCTTATGTTCCTGACCATTGACGTTGATGAACTAACGGAGTTTAGCACAGAAATGGATGTAAAAGCTACTCCAACATTCTTCTTCTTTAGAGATGGTAAACAGATTGATAAACTTGTGGGAGCCAACAAGCCTGAACTGCAGAAAAAGATAACCGCAATTGTTGATTCACAGGTCCCCACTGGTCAGAAGTAA | 426 | 44.37 | MGLCCFSSTPTDEEEIDSHPEFAGGNVTLITTKSAWDQKLSEAKIQGKVVIANFSATWCGPCKSIAPHYVELSEKYPSLMFLTIDVDELTEFSTEMDVKATPTFFFFRDGKQIDKLVGANKPELQKKITAIVDSQVPTGQK | 141 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fli3g00895 | 141 | PANTHER | THIOREDOXIN | 25 | 130 | IPR050620 | - | |
| Fli3g00895 | 141 | PRINTS | Thioredoxin family signature | 97 | 108 | - | - | |
| Fli3g00895 | 141 | PRINTS | Thioredoxin family signature | 58 | 67 | - | - | |
| Fli3g00895 | 141 | PRINTS | Thioredoxin family signature | 50 | 58 | - | - | |
| Fli3g00895 | 141 | ProSiteProfiles | Thioredoxin domain profile. | 13 | 133 | IPR013766 | - | |
| Fli3g00895 | 141 | SUPERFAMILY | Thioredoxin-like | 23 | 132 | IPR036249 | - | |
| Fli3g00895 | 141 | Gene3D | Glutaredoxin | 1 | 139 | - | - | |
| Fli3g00895 | 141 | ProSitePatterns | Thioredoxin family active site. | 51 | 69 | IPR017937 | - | |
| Fli3g00895 | 141 | Pfam | Thioredoxin | 28 | 129 | IPR013766 | - | |
| Fli3g00895 | 141 | CDD | TRX-family | 40 | 128 | - | - | |
| Fli3g00895 | 141 | FunFam | Thioredoxin | 24 | 133 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fli3g00895 | K03671 | thioredoxin |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2370499 | Fli | Fli3g00895 | Fli-Chr3:24852259 | Fli6g01449 | Fli-Chr6:76210799 | |
| 2388576 | Fli | Fli3g00895 | Fli-Chr3:24852259 | Fli1g01185 | Fli-Chr1:40100032 |