AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli3g00938 ATGCCTCCTCAACGCCAACCTCGTAGGAATACACGCATGCCAAATCATTTTAACACTGACACTGCTTCAAATGAGACTCCAGTTGATCCGAACATAGTCTCTGCTATCAACCAAGCTTTTGCAGGATTGCTACCTAACCTCGTTGCTCAAACCGTTGATGCAGTTCTTCACCAAACTCGTTCTGAAAGACATGCTAACTCTAATCAAGGTGATGCGGTTAATGCAAATAACGCAGATAACACTGCAGAGGGCATCCACGTTTGGCTCCAGAGGTTTCAAAAGCAAAAGCCAAGATCCTTTAGTCATGCAGAAACTCCAATTGAAGCTAGAAACTGGATAGCCCATGTAGAGAAGATCTTTGAAGTATTAGGAGTTTCAGATGAGTACAAAGTCAGATTGGCCACGTATAAATTAGAGGATGATGTACAAACTTGGTGGGAAGGACTAAAGCAAATAAGAGGAGGAGAAGCTTATGCGGCTAGTCTTTCTTGGGCTGATTTTCGTACGATCTTTTATGATAATTTTTTCTCTAATGCTGAAAGAGAAGCCTACATCAGAGAATACACTGTCATTCGACAAGGAAATGATGAACCGGCATCAGACTTCATGATTCGATTCGCTAGGCTGGCTAATATTGTTGGAGAAGCAGCAGGGTCTGCAGCTGTTCAAGCAGAAAAGTGA 681 42.58 MPPQRQPRRNTRMPNHFNTDTASNETPVDPNIVSAINQAFAGLLPNLVAQTVDAVLHQTRSERHANSNQGDAVNANNADNTAEGIHVWLQRFQKQKPRSFSHAETPIEARNWIAHVEKIFEVLGVSDEYKVRLATYKLEDDVQTWWEGLKQIRGGEAYAASLSWADFRTIFYDNFFSNAEREAYIREYTVIRQGNDEPASDFMIRFARLANIVGEAAGSAAVQAEK 226
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli3g00938 226 MobiDBLite consensus disorder prediction 1 29 - -
Fli3g00938 226 MobiDBLite consensus disorder prediction 8 29 - -
Fli3g00938 226 Pfam Retrotransposon gag protein 132 214 IPR005162 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli3g00938 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2361033 Fli Fli16g00596 Fli-Chr16:33138570 Fli3g00938 Fli-Chr3:26328804
2370536 Fli Fli3g00938 Fli-Chr3:26328804 Fli14g00980 Fli-Chr14:18628517
2407941 Fli Fli12g00042 Fli-Chr12:3555279 Fli3g00938 Fli-Chr3:26328804
2420100 Fli Fli2g03500 Fli-Chr2:94829626 Fli3g00938 Fli-Chr3:26328804
2422480 Fli Fli3g00938 Fli-Chr3:26328804 Fli4g00233 Fli-Chr4:9847582
2422518 Fli Fli3g00938 Fli-Chr3:26328804 Fli4g00945 Fli-Chr4:68263894
2423592 Fli Fli3g00938 Fli-Chr3:26328804 Fli7g01030 Fli-Chr7:62295346