AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli3g01134 ATGTCAAGGCTCTACGTAATCAGAAATACTAAGAGAGCAGCGCACGCGGTTCGAACAAGTAATTGGGGTATTTATTCAGAAGATGGGTCAATCGTTAGATCTGGTTTTAACAACTTTAAATACAGGATGTACTCTAATAATAGAGGGTTTGCTTCCATCTTCGCATGCAAATCCAAGTTTTCTGTTGGTAAGAATACCTGCAGCAGAAACTTTTCCTCTTATTCAGCCAATAACACAATAACACATCATGCCCAAAATGCTTGGAGGAGGCTTTTCAATAGTTTGGATCGAGATAAGCAACTTTCTGGCATAAATAGAATCGCTCAAGCATTTAGTTTGGCATTGAGTCTCTCATATGTTGTTCTTCCTGGCATATTTGCCTTCACATGTGGTAATCTGGTGTTAGAAGATGCTGGGTCAAATATTGGCTCTTTTCAACCAAGAAATACTTTATACACACGCGCTGAATATGGACATGCGTTCTTGATCTCATCATTGATTTCAGTATTTGAAGGTTTCATATTGCTGTTCAGAGCTATGTATTTGGCAATTTTGTTCTCACCCAGTATGGCAATGGCCCCATTTGCAGAGTATTTTGGGACCTCATCCAGACAACAATGGCTTCATCTCGTACGCCGTACTTTAGAAATAGCAGGTCCTGCATTTATTAAATGGGGTCAATGGGCCGCCACACGGCCAGACCTTTTCCCTACAGACTTGTGCACGGAGCTCTCTAAGCTTCACAGCAAGGCTCCTGAACATAGCTTTGCTTATACAAGAAAGACAGTTGAAAAGGCTTTTGGTCGTAAAATATCAGATGTTTTTGATGATTTTGAGGAAGTTCCGGTAGCTTCAGGAAGCATTGCACAAATTCATCGAGCTTCTTTGAGATATGGATATCGTGGCAGGCGTGACAAGCCTCTATTAGTTGCAGTTAAAGTTAGACATCCTGGGGTTGGTGAATCAATTAAAAGAGATTTTGACATTATTAATGTAGTTGCAAAAATATCTAAATTTATTCCTACACTTAATTGGTTGAGATTAGATGAAAGCGTTCAACAGTTTGCAGTCTTTATGATGTCACAAGTCGATCTTGCTCGGGAAGCTGCTCATTTGAGTAGATTTATATATAATTTTCGCAGCTGGAGGGATGTTTCTTTCCCTAAACCTGTATATCCACTTGTACATCCTGCTGTTTTGGTGGAAACTTTTGAACAAGGTGAAAGTGTATCACGTTATGTTGATGAACTTGAAGGACATGTTCGACTTAAGAGTTCTCTTGCACACATTGGGACCCATGCTCTTCTAAAAATGCTGCTGGTGGACAACTTCATTCATGCTGACATGCATCCTGGAAATATTCTTGTGAGGAGCAAACCTTCTCGTAAAGGGATTTTCAAATCGAAGCCGCATGTCATATTCCTTGATGTAGGCATGACTGCTGAACTATCAAAGAGTGATAGAGTCAATCTGTTGGAATTTTTTAAGGCTGTTGCTCGTAGAGATGGAAAGACTGCAGCAGAGTGCACATTGAGGCTTTCAAAACAACAGAATTGTCCTAATCCTCAGGCCTTTATCAAGGAAGTTACTGAGTCTTTTGATTTTTGGGGTAGTCCAGAGGGTGACATTGTACATCCTGCTGATTGCATGCATCAAGTGCTGGAGCAAGTGAGACGTCACAGAGTCAATGTTGATGGAAATGTCTGCACTGTCATGGTTACAACTCTGGTTCTTGAGGGTTGGCAACGGAAGCTTGACCCTGATTACGATGTAATGCACACGCTTCAAACATTGTTGCTCAAAGAAGACCGGGCAAAGTCACTAACCTACACAATTGAAAGCTTGATGGCTCCATAG 1857 40.98 MSRLYVIRNTKRAAHAVRTSNWGIYSEDGSIVRSGFNNFKYRMYSNNRGFASIFACKSKFSVGKNTCSRNFSSYSANNTITHHAQNAWRRLFNSLDRDKQLSGINRIAQAFSLALSLSYVVLPGIFAFTCGNLVLEDAGSNIGSFQPRNTLYTRAEYGHAFLISSLISVFEGFILLFRAMYLAILFSPSMAMAPFAEYFGTSSRQQWLHLVRRTLEIAGPAFIKWGQWAATRPDLFPTDLCTELSKLHSKAPEHSFAYTRKTVEKAFGRKISDVFDDFEEVPVASGSIAQIHRASLRYGYRGRRDKPLLVAVKVRHPGVGESIKRDFDIINVVAKISKFIPTLNWLRLDESVQQFAVFMMSQVDLAREAAHLSRFIYNFRSWRDVSFPKPVYPLVHPAVLVETFEQGESVSRYVDELEGHVRLKSSLAHIGTHALLKMLLVDNFIHADMHPGNILVRSKPSRKGIFKSKPHVIFLDVGMTAELSKSDRVNLLEFFKAVARRDGKTAAECTLRLSKQQNCPNPQAFIKEVTESFDFWGSPEGDIVHPADCMHQVLEQVRRHRVNVDGNVCTVMVTTLVLEGWQRKLDPDYDVMHTLQTLLLKEDRAKSLTYTIESLMAP 618
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli3g01134 618 Pfam ABC1 atypical kinase-like domain 246 508 IPR004147 -
Fli3g01134 618 CDD ADCK2-like 246 536 IPR044095 -
Fli3g01134 618 PANTHER AARF DOMAIN CONTAINING KINASE 2 (PREDICTED) 55 610 IPR052402 -
Fli3g01134 618 SUPERFAMILY Protein kinase-like (PK-like) 254 586 IPR011009 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli3g01134 K08869 aarF domain-containing kinase
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr3:42123196 Fli4g01487 Fli-Chr4:85318541 dispersed
Fli Fli-Chr2:51553396 Fli3g01134 Fli-Chr3:42123196 wgd