AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli9g01365 ATGGCGTCTGTTAATCAGGTTCATCACTCTCCTCTCGCCGGAAACAACCGCCGTTTCAATCGTCATATCCATTTTTCCGGCCTCCGATCACCACCACTTGCCGGCAAAACACTCGTCGATTTCGCCTGTTCATCTCTCCGATCAAAGTCAATCATCCCTAATTCACTATCTAATCGACAACATATTACTCCCTGTGCTACCGGCGGTGGTGGTACTGGTGTCCGCCACGGCGGAGGAGGTGGTGGTGACGGTGGTGATAGCCACCGGAGTGGTGGAAACTCCGACGACTCATCAATGTCATCATCTATCAACAGTTTTGCCCCAATTGGTGCTTTCCTTAACGGTTGGAGATCTAGGGTTTCTGCTGATCCCCAATTTCCATTCAAGGTGTTAATGGAAGAAGTTGTAGGCGTGAGTGCCACCGTGTTCGGTGACATGGCGACTCGCCCGAATTTCGGGCTAAACGAGCTCGATTTCGTGTTCTCGACACTCGTAGTAGGCTCAATCCTCAACTTCACCCTTATGTATCTGTTAGCACCCACCATCACATCAGCATCAGCATCAGCCACACTCCCTTGGATATTCACAAACTCACCCACGAGCCACATGTTCGAGCCGGGTGCATACACGCTGGTTAACCGGCTAGGGACATTTGTGTACAAAGGGACCCTGTTTGCAGCTGTGGGGTTTGCAGCTGGTTTGGTTGGGACCACGTTGTCCAATGGGTTGATCATGGTTAGGAAGAGGATGGACCCTGGGTTCGAGTCGCCTAACAAGGCTCCACCTACTGTTTTGAATGCGGTCACGTGGGCGGTTCATATGGGCTTGAGTGCTAACTTGAGGTACCAGAGTTTGAATGGGGTCGAGTTTGTGCTCGCGAAGGGGCTGCCGCCGTTGTTGTTTAAGGGCGCGGTGGTCGGGTTGCGGTTGGCGAACAATGTTGTTGGTGGTATGACGTTTGTGATGTTGGCTAGGGTGACCGGATCACAAAGTGCTGGTGAGAAGAATGCCGATGAAGACAAGGAGAAGAAGTCGTGA 1038 51.93 MASVNQVHHSPLAGNNRRFNRHIHFSGLRSPPLAGKTLVDFACSSLRSKSIIPNSLSNRQHITPCATGGGGTGVRHGGGGGGDGGDSHRSGGNSDDSSMSSSINSFAPIGAFLNGWRSRVSADPQFPFKVLMEEVVGVSATVFGDMATRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTITSASASATLPWIFTNSPTSHMFEPGAYTLVNRLGTFVYKGTLFAAVGFAAGLVGTTLSNGLIMVRKRMDPGFESPNKAPPTVLNAVTWAVHMGLSANLRYQSLNGVEFVLAKGLPPLLFKGAVVGLRLANNVVGGMTFVMLARVTGSQSAGEKNADEDKEKKS 345
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli9g01365 345 MobiDBLite consensus disorder prediction 63 100 - -
Fli9g01365 345 Pfam Protein RETICULATA-related 119 288 IPR021825 -
Fli9g01365 345 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 49 332 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli9g01365 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2370489 Fli Fli3g00884 Fli-Chr3:24493660 Fli9g01365 Fli-Chr9:70681647
2381614 Fli Fli9g01361 Fli-Chr9:70450886 Fli9g01365 Fli-Chr9:70681647