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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli9g01384 ATGCAACAAATCATGAAAACCAAATCAAGATCAGAAGTGAGCCGAAGAGCGTGGCAAATACTCCAGTTAGCCTTACTATGGGCCCAAAAAGGCGGAGTCTTTGTTCTCAAGAAACGCCTTATGCACGACATATCACATATCCTCAAGAGCCATGGTCACTCTAAAAAAGACAGTGGTGCACTACAATATGGTCATCGTCAACTATCGTTTGATGCAACCCCTATCATACATGTTAGGATGCATCGTCCTAACTCAATGCGGTTCCGCTTGCCTCACATCCCTTGCATCAATCCACACGTCGATTGTTCGGATATCTTTGATCAGTTTGATGATCATGAGAGTCTTAGGTACTCGTGTTGTGAGGCGAGAGAGAGTTTCTTGATCGCGAATGGTGACGAACATGATGAAAAAGATTATGATGATGATGATGAATGTGATCAGTTTTGTGAGGAACAAGAAAATGGAATTGATCTCAAGGCTGAACAGTTTATAGCCCACTTCTATGAGCAACTTAAGCTTCAAAGGCAACTCAACACAAGAAAAAATGACTAA 552 41.85 MQQIMKTKSRSEVSRRAWQILQLALLWAQKGGVFVLKKRLMHDISHILKSHGHSKKDSGALQYGHRQLSFDATPIIHVRMHRPNSMRFRLPHIPCINPHVDCSDIFDQFDDHESLRYSCCEARESFLIANGDEHDEKDYDDDDECDQFCEEQENGIDLKAEQFIAHFYEQLKLQRQLNTRKND 183
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli9g01384 183 PANTHER AVR9-CF-9 RAPIDLY ELICITED PROTEIN-RELATED 12 179 - -
Fli9g01384 183 Pfam Cotton fibre expressed protein 154 176 IPR008480 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli9g01384 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
392414 Fli3g00839 Fli9g01384
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2370452 Fli Fli3g00839 Fli-Chr3:22915561 Fli9g01384 Fli-Chr9:71132625