AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli9g01419 ATGGCCACTCCTGATGTCTTTCTGCAAGGCGAACACGATCCTTTCTCATCGTCTTCATCTCAATTTGATCACACCAAAGGTGATGCTAAATCGCGAGGATTTGAGCTGGAGAAGAAAATTGAATATCTTGAGAGCTTGAACGATAGGGTTAGTAACAGACGAGCACGTAGATGGATAAATGATCGTATATTGTTGGAGCTTGTACCTCGTTTGACTGGGGATGAAATCAGAGGGTTGTTTGCTCCACCACCTTGGGGTGATGAGCCACAACCGTCACCATTTTCCATGACAAATGTGGGGGAGTGGGACAAATTTAGGAATATAGACATGGACAAAGAGGCTGGTGCAATAGCGACTCTTAAAGGTTCCTCATCAAAGAAGAAAAGTAGTGTGGATGCTGATAAGATAGCTGCGATAAATGCATGGCACAGGGTTGACTGCAGAACCAGAGAGGCATTTCGCCGAAGCTTCCTTCCAGAACTTGTTAATGGTTTTGAGGAGAACATACGGGCCTTTGTCTCGGAGGCAGCTAATGAGGAGGTTCTTGTGATGTATGCTCAAGATCCTTTCCATAGGCTGTTACTTCATGGTGTTTGCGAGTTCTACAACTTGGTGTCAACAACGGAGTCCGAGACCAAAGGTACAAAGGTCTTAAAGATGACCAAAATCAAGAAGAAAAAGTCGGGCAACAACGAGCTCCCGACCATCACCCTTTGCGAGTTCCTGAAAATGGCAAAGGGTGGTTTTTGGTAG 753 45.42 MATPDVFLQGEHDPFSSSSSQFDHTKGDAKSRGFELEKKIEYLESLNDRVSNRRARRWINDRILLELVPRLTGDEIRGLFAPPPWGDEPQPSPFSMTNVGEWDKFRNIDMDKEAGAIATLKGSSSKKKSSVDADKIAAINAWHRVDCRTREAFRRSFLPELVNGFEENIRAFVSEAANEEVLVMYAQDPFHRLLLHGVCEFYNLVSTTESETKGTKVLKMTKIKKKKSGNNELPTITLCEFLKMAKGGFW 250
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli9g01419 250 MobiDBLite consensus disorder prediction 1 31 - -
Fli9g01419 250 Gene3D - 155 247 IPR036867 GO:0003676(InterPro)
Fli9g01419 250 CDD R3H 165 216 - -
Fli9g01419 250 ProSiteProfiles R3H domain profile. 159 227 IPR001374 GO:0003676(InterPro)
Fli9g01419 250 Pfam R3H-associated N-terminal domain 36 155 IPR025952 -
Fli9g01419 250 SUPERFAMILY R3H domain 142 221 IPR036867 GO:0003676(InterPro)
Fli9g01419 250 PANTHER R3H DOMAIN-CONTAINING PROTEIN 4 16 247 IPR039629 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli9g01419 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
392410 Fli3g00701 Fli9g01419
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr3:18840284 Fli9g01419 Fli-Chr9:71846313 wgd