AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli9g01432 ATGGCTCCGGCAGCCGTGGCTTCATCGGTGGCCGATCGTATGCCGGTGATGACGCCGGCGACGGCGGTTCCTCCATCGGCGGTGGTGCCGGAGGCGTTCGCTAAGGATTCAATAATCTCGTGGTTCAGAGGCGAATTCGCTGCGGCGAACGCGATTATCGACGCGTTGTGTGGCCATTTGTCGCAGTTTGAAGGCGGAAGGTGTGAGTACGAGTCGGTGTTCGCCGCTATTCACCGTCGTCGGTTGAATTGGATCCCGATCCTTCAGATGCAGAAGTATTATTCGATCGCTGATGTGACGGTGGAGCTTCGGAAAGTCGCGGAGGCGAAGGTAACAGGCGTTGAGAAGATCGTTGAAGAGGATGCTCCGTCGCCGGTGACGGAGTTCGATCGTGAAATTGTGACGGAATCGAACGGAATCAATGGCGGTGGTGAGGCTGTTGTTGTTGATGATGGTGATGATGGTTCAGGCAAGGATCATTCGCCGAAGAGTGAGATCACAGATTCAGGATCTCATGAAGTGCATTCGGCGGTAAAAAGCATTGAAATATGCTCAAACCAAGAAGATTGGGAGGCACGACGCGCTGAAATGAAGATAACAAAAGGGTTTGCAGCCAAGGAGTCTGTAAAAGGGCACATGGTGAATGTCGTGAGAGGCTTGAAGTTGTATGAGGACATACTTAACACGACTGAGCTATCTAAGTTGATTGACTATGTAACTAAACTCCGAGTTGCTGGCCAAAATGGTGAACTCTCAGGTGAGACTTTTATCATGTACCACCAACAATCAAAGGCAATTAAGAGAGAACTTATTCAATTTGGAGCTCCAATTTTTGGACAGATCAAAGATGAGGTTACAGCTACAAATAAATTTCAAGAGAACATTATCGACCCGATTCCTGCTCCTCTTGAAGGTGTCATTGACCATCTAATCCAGCTTCACTTGATTTCGGAAAATAGACGACCCAACAGTTGTATCATAAACTTTTTTGACGAGGGAGAATTTTCACAACCTTTCCTGAAACCACCACATTTAGAACAACCGATCTCAACACTTGTTTTATCCGAATCAACAATGGCTTTTGGGCGGAGTCTAGTTTGTGATAACGATGGCAACTATAAAGGACCGCTCATGCTTTCTCTCAAGGAAGGGTCACTTTTAGTGATGAGGGGAAACAGTGCTGACATGGCACGCCACGCCATGTGTCAATCTCCAACTAAACGAATCAGTGTCACGTTTTTCAAAGTCCGAATAGACCCCTACGATAGAAATCCACCATCAAATGATCCCATGGCTGGGGCCATGACTGTATGGCAGCCCGACCTCGGCCTTTCAGGTCCACTAATCTCACCAACAAGATACGATGTCGTCCCTAAATGGGGTGCCATTCGAGCCCCCCAACTTCTTATGTTAGCACCGGTCCGTCCAATGGTTATGACCCCCAGAAGGTTACCACGTGGAGGGACTGGTGTTTTCTTACCTTGGAACGGTGGTCCAAAGAAACCGGCTAAACATCTACCTCCTCGTGCTCAAAGGGGACGTCTTCTTGCACTGCCGACATCCATCGAGCCACCCAAGATGGTTCAAACCCCTGGTTCTGGCATTAGCGTTGCTTGA 1617 48.67 MAPAAVASSVADRMPVMTPATAVPPSAVVPEAFAKDSIISWFRGEFAAANAIIDALCGHLSQFEGGRCEYESVFAAIHRRRLNWIPILQMQKYYSIADVTVELRKVAEAKVTGVEKIVEEDAPSPVTEFDREIVTESNGINGGGEAVVVDDGDDGSGKDHSPKSEITDSGSHEVHSAVKSIEICSNQEDWEARRAEMKITKGFAAKESVKGHMVNVVRGLKLYEDILNTTELSKLIDYVTKLRVAGQNGELSGETFIMYHQQSKAIKRELIQFGAPIFGQIKDEVTATNKFQENIIDPIPAPLEGVIDHLIQLHLISENRRPNSCIINFFDEGEFSQPFLKPPHLEQPISTLVLSESTMAFGRSLVCDNDGNYKGPLMLSLKEGSLLVMRGNSADMARHAMCQSPTKRISVTFFKVRIDPYDRNPPSNDPMAGAMTVWQPDLGLSGPLISPTRYDVVPKWGAIRAPQLLMLAPVRPMVMTPRRLPRGGTGVFLPWNGGPKKPAKHLPPRAQRGRLLALPTSIEPPKMVQTPGSGISVA 538
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli9g01432 538 SUPERFAMILY Clavaminate synthase-like 211 413 - -
Fli9g01432 538 Gene3D - 203 420 IPR037151 -
Fli9g01432 538 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 32 521 IPR044842 GO:0003729(InterPro)|GO:0006402(InterPro)|GO:0032451(InterPro)
Fli9g01432 538 MobiDBLite consensus disorder prediction 139 172 - -
Fli9g01432 538 MobiDBLite consensus disorder prediction 151 172 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli9g01432 K10767 mRNA N6-methyladenine demethylase [EC:1.14.11.53]
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Event-related genes

Select Gene_1 Gene_2 Event_name
392406 Fli3g00681 Fli9g01432
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr12:30281869 Fli9g01432 Fli-Chr9:72267098 dispersed
Fli Fli-Chr15:53844328 Fli9g01432 Fli-Chr9:72267098 dispersed
Fli Fli-Chr1:110905676 Fli9g01432 Fli-Chr9:72267098 dispersed
Fli Fli-Chr1:110698040 Fli9g01432 Fli-Chr9:72267098 wgd
Fli Fli-Chr3:18138922 Fli9g01432 Fli-Chr9:72267098 wgd