AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli9g01435 ATGCTCAATATCTTCAACAAAAACTTCCGGCGACTCTGCTCAAAGCTCCGGTGGCCGGTGCGCCGCCGTGCAAAGCCCAAAGTCATCATCAAAAGGTTCGGAAAGTCAAACTCTAGAGGTCAAGATTCATCAATCACAAATGGGTCAGCGACAATTCACCCAAATAATCATCTGGGTGTTTCAAAATCTGAAAACCCAATTCGAATTGCAACGTTTAATGCTGCTTTATTCTCCATGGCACCAGCAGTTCCAGAGTTGACTAAAAAAGGCTCAAGCTTTGACTATGGCGAAGATGATAAAGATTGCACAAAGGTAACCTCTGATTCTTCAGTTTCTTACAGTAGTTCGAGATCAAGATCAATGGTTGATCGACCCAAAAGTATATTGAAACAATCACCATTGCATTCAAGCTCCATTGGTAGTTCAGAAACTCAATCAAAACAGCAGAAATTTGCAAAGTCAAAGCTGAGAGTGTCTATAAACTTACCTGATAATGAGATCTCATTGAGGCGAAGTGGGCAACTGAGCTTTGTTGTAGATGAAAACGAAACTGACCCGAGTTCGAAAACTAGTAGTTCTAAGGGTATAAGCAAGATTTTGAAAGGAAAGGGTGTTTTGAGATCACAAAACAGTTTTTCTTCAAGAGAAGTTGAAAGTCAAAGGGGAAGTTATCGGTCAACGAAGACCGTTCTTGAGGTTTTGAGAGAATTGGATGCAGATATATTGGCTTTACAGGATGTAAAAGCTGAAGAAGAAAAAGATATGAAGCCATTGTCTGATCTTGCTGCTGCTTTGGGTATGAATTATGTTTTTGCAGAGAGTTGGGCACCTGAATATGGTAATGCAGTGCTATCGAAATGGCCGATTAAACGATCCAAGATTCAGAAGATTTTTGATGATTCTGATTTCAGGAATGTTTTAAAGGCGACAATTGATGTTCCCCAAACCGGAGAAGTTGATTTTCATTGTACCCTTCTTGATCATCTTGATGAGAATTGGCGAATGAAACAGATAAATGCAATAATCGAATCTAATGACAGACCACACATCTTAGCCGGAGGTATCAACTCTCTTGATGAAACAGACTACTCGCCTGAAAGATGGACCGACATTGTTAAGTACTATGAAGAAATGGGAAAACCAACACCAAAAGTTGAAGTGATGAAGTACCTAAAGGACAAACAGTACAGCGACGCTAAGGATTGTGCAGGCGAATGTGAATCTGTGGTCATTATCGCTAAAGGCCAAAATGTGCAGGGTACTTGCAAATACGGTACAAGGGTAGATTACATATTGGTGTCCCCTGATTCTCCCTACAAGTTTGTTCCTGGTTCATATATGGTTCTATCATCAAAGGGTACTTCTGACCATCACATAGTCAAAGTTGATGTAACTAAGGTAGATGAATCTGGTCAACAACCGTACGTTAGGAGGCCGCAACGACATCCTAAACAAAAGGTTGTGAAGATTATGAATTCTAATTCATCAAAAGGGGTATGGAAAATGCAAACTTTAGACAGATAG 1524 40.16 MLNIFNKNFRRLCSKLRWPVRRRAKPKVIIKRFGKSNSRGQDSSITNGSATIHPNNHLGVSKSENPIRIATFNAALFSMAPAVPELTKKGSSFDYGEDDKDCTKVTSDSSVSYSSSRSRSMVDRPKSILKQSPLHSSSIGSSETQSKQQKFAKSKLRVSINLPDNEISLRRSGQLSFVVDENETDPSSKTSSSKGISKILKGKGVLRSQNSFSSREVESQRGSYRSTKTVLEVLRELDADILALQDVKAEEEKDMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRSKIQKIFDDSDFRNVLKATIDVPQTGEVDFHCTLLDHLDENWRMKQINAIIESNDRPHILAGGINSLDETDYSPERWTDIVKYYEEMGKPTPKVEVMKYLKDKQYSDAKDCAGECESVVIIAKGQNVQGTCKYGTRVDYILVSPDSPYKFVPGSYMVLSSKGTSDHHIVKVDVTKVDESGQQPYVRRPQRHPKQKVVKIMNSNSSKGVWKMQTLDR 507
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli9g01435 507 MobiDBLite consensus disorder prediction 36 60 - -
Fli9g01435 507 MobiDBLite consensus disorder prediction 130 155 - -
Fli9g01435 507 MobiDBLite consensus disorder prediction 91 105 - -
Fli9g01435 507 SUPERFAMILY DNase I-like 227 464 IPR036691 -
Fli9g01435 507 Coils Coil 234 254 - -
Fli9g01435 507 Pfam Endonuclease-Exonuclease-phosphatase family 222 457 IPR005135 GO:0003824(InterPro)
Fli9g01435 507 Gene3D Endonuclease-exonuclease-phosphatase 210 466 IPR036691 -
Fli9g01435 507 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 16 463 IPR051916 GO:0005783(PANTHER)|GO:0006506(PANTHER)
Fli9g01435 507 FunFam Endonuclease-exonuclease-phosphatase family protein 214 467 - -
Fli9g01435 507 MobiDBLite consensus disorder prediction 35 60 - -
Fli9g01435 507 MobiDBLite consensus disorder prediction 106 122 - -
Fli9g01435 507 MobiDBLite consensus disorder prediction 89 155 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli9g01435 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
392404 Fli3g00678 Fli9g01435
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr3:18014670 Fli9g01435 Fli-Chr9:72300088 wgd