AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli9g01467 ATGGGGGAAACGAAATCGACATCAGAGAACAGATTGAAGCCATCGACCAAGTGTTCTGATGAGAATCAGGTGCCGTTGAAGTGTAGAAACAACAATGTGCAGTCAAATTTGAAGCCCAGATCGATTTGGGGCTCGAATATTGTTAAAGGGTTTTCGGGTGATAAGAAAACAAGATCACAACAAGTGGTGAAGAAATCTCAACAGCAACCTGTTACAACAGTGTCCAACACGAGTTCAAGAAACCCCTTTGGTTCTAATCGAGCGAAACGGTCTCTTATCGGAGATTTATCGTGTTCTGTCACTGCTACACAGGTTCATCCGCAAGGGGTTCATCATCACTGTGAACAGAACCAGAGGCTGTATAAGTCATCGTCTTCTTCAGGTTCTCGTGATCTGTTTGCTGAGCTTGATCAGCTCAGAAGCTTGCTTCAAGAATCTAAAGATAGAGAAGCTAAGTTGCAAGCTGAGTTGTGTGATTTCAAGAAGAAAAATCTTCAGGCTTTGGATCTTGAACGGATAGTTGAGTCAAAGACTAGTGAAATCGAATCTCTTAAAAGCAAGATTGATTTGCTCGAATCGGAGAACACTAGTCTTTCTGAGCAGTTGAATTGTCAGCAGGTGCAAGAAAATATAAAAAAAGGGGTTGTTAATAATAGTGTTGAGGTAGATGTTCTTAAGTTGAGGAGGTTGAATGCTGAGCTTCATCTTCAAAAGAGAAATCTTTGTTGCAGAATATCTTCAATGGAGTCTGAACTAGCTGCCATTGCCAAAGATTCTGAGAATGAATTTGTTAAGAAGATAAAAGCTGAGGCATCTATGTTAAGACAAACAAATGAAGATTTATGTAAACAAGTTGAAGATCTACAAGTAAGTCGATTAAACGAGGTTGAGGAGCTTGTGTATCTAAGATGGGTCAATTCCTGTCTTAAAAACGAGTTGCAAAATTCGGCGTTTGTGTCTTCTGAGATAACATCAAGTCCAGCTTCTGTTGAATGGCTCAATGGTTCTATATCAAGTGATGAAAGTTCTGAACACGGGAGTACCAAAAAGAAGCTAAGTTTGATCAAGAAAATGAAAAAATGGCCTGTTCTTGATGAAGAAACAAACGCCTCTGAACCGATGAACTATAAATTGAATCTTGGTTGGTCTGAAGGAAGAAGGCATTCTATCAGTGGAGCAAATTGCTGTCAAGAAGATCTGGTGGTGAATAAAAGAAGACAATCTGATGGTTTTATATGTTCAATGGAGATGGAGGGTGTAAATGATTTGAATGTGATCCAAGGGTCACAATTGCGTGAAGCTACGAAACTGAAAACATTTTTGGATGTTGAAAAAAGGGCTTTGCGTGTTCCTAACCCCCCTCCGAGGCCTTCTAGCTTTACTTCTAAGGAACATACAGAGGTTACTAGTCGAGTGTCACCGCCACCACCACCACCACCACCACCTCCGCCCCCACCACCTCCAAAATTCAGGGGAAGAAACAACGGTGGAGGGGTTGTTCAACGAGCTCCAGAAGTGGTTGAGTTTTATCATTCTCTTATGAAAAGGGACTCCAGGAAAGATTCACTAAATGATGGGATTTGTGATGCCTTGGATGTCAATAATGTTCGAACTAGTATGATTGGTGAAATTGAAAACCGGTCATCACATTTGCTTGCTATAAAGGAGGATGTTGAGACTCAAGGGGAATTTGTGAATTCTTTAATACGCGAGGTCAACAATGCTGTTTATCCGGATATAGAAGATGTGGTGGCTTTTGTGAACTGGCTGGATGATGAACTCGGCTTTCTTGTGGATGAGAGAGCTGTGCTGAAACACTTTGATTGGCCGGAGAAGAAAGCCGATACACTAAGAGAGGCAGCATTTGCGTATCGCGATCTAACAAAGCTGGAGCATGAAATCTCAAACTACAAGGACAATTTCCACATACCATGTGACTTGGCATTGAAGAAAATGGTTTCCTTGTCTGAAAAAATGGAGCGTATCGTTAATAACCTTCTTAGAACAAGAGATCTGCTGATGCGTAATTGCAAAGAGTTCCATATACCCGCAGATTGGATGCTTGATTCGGGAATATTAAACAAGATTAAGCTGGGATCAGTTAAGTTGGCAAAGAAATACTTGAGAAGAGTTGCTACAGAACTTCAAACGAAGGGGACGTCAGAGAAAGATTCTTCAATGGACTATATGCTACTTCAAGGAGTGCGATTTGCTTTCCGCATTCATCAGTTTGCTGGTGGATTTGATGTCGATACAATGCATGCGTTCGAGGAGCTTCGTAATGTGGCTCTTGTTTTGAACAAAAAGTAG 2310 41.08 MGETKSTSENRLKPSTKCSDENQVPLKCRNNNVQSNLKPRSIWGSNIVKGFSGDKKTRSQQVVKKSQQQPVTTVSNTSSRNPFGSNRAKRSLIGDLSCSVTATQVHPQGVHHHCEQNQRLYKSSSSSGSRDLFAELDQLRSLLQESKDREAKLQAELCDFKKKNLQALDLERIVESKTSEIESLKSKIDLLESENTSLSEQLNCQQVQENIKKGVVNNSVEVDVLKLRRLNAELHLQKRNLCCRISSMESELAAIAKDSENEFVKKIKAEASMLRQTNEDLCKQVEDLQVSRLNEVEELVYLRWVNSCLKNELQNSAFVSSEITSSPASVEWLNGSISSDESSEHGSTKKKLSLIKKMKKWPVLDEETNASEPMNYKLNLGWSEGRRHSISGANCCQEDLVVNKRRQSDGFICSMEMEGVNDLNVIQGSQLREATKLKTFLDVEKRALRVPNPPPRPSSFTSKEHTEVTSRVSPPPPPPPPPPPPPPPKFRGRNNGGGVVQRAPEVVEFYHSLMKRDSRKDSLNDGICDALDVNNVRTSMIGEIENRSSHLLAIKEDVETQGEFVNSLIREVNNAVYPDIEDVVAFVNWLDDELGFLVDERAVLKHFDWPEKKADTLREAAFAYRDLTKLEHEISNYKDNFHIPCDLALKKMVSLSEKMERIVNNLLRTRDLLMRNCKEFHIPADWMLDSGILNKIKLGSVKLAKKYLRRVATELQTKGTSEKDSSMDYMLLQGVRFAFRIHQFAGGFDVDTMHAFEELRNVALVLNKK 769
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli9g01467 769 MobiDBLite consensus disorder prediction 448 498 - -
Fli9g01467 769 MobiDBLite consensus disorder prediction 7 23 - -
Fli9g01467 769 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 60 761 IPR040265 GO:0009658(PANTHER)|GO:0009707(PANTHER)
Fli9g01467 769 Coils Coil 167 208 - -
Fli9g01467 769 MobiDBLite consensus disorder prediction 52 85 - -
Fli9g01467 769 Coils Coil 620 640 - -
Fli9g01467 769 Coils Coil 264 284 - -
Fli9g01467 769 MobiDBLite consensus disorder prediction 1 23 - -
Fli9g01467 769 Coils Coil 129 156 - -
Fli9g01467 769 MobiDBLite consensus disorder prediction 471 491 - -
Fli9g01467 769 SUPERFAMILY Formin homology 2 domain (FH2 domain) 477 629 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli9g01467 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
392398 Fli3g00581 Fli9g01467
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr15:55053913 Fli9g01467 Fli-Chr9:72800281 dispersed
Fli Fli-Chr2:97398879 Fli9g01467 Fli-Chr9:72800281 dispersed
Fli Fli-Chr3:7065033 Fli9g01467 Fli-Chr9:72800281 dispersed
Fli Fli-Chr7:1552718 Fli9g01467 Fli-Chr9:72800281 dispersed
Fli Fli-Chr9:24134028 Fli9g01467 Fli-Chr9:72800281 dispersed
Fli Fli-Chr9:72800281 Fli8g00860 Fli-Chr8:21592241 transposed