AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra11g02253 ATGGAGCTCGTACCCTACTCCGATCCCACCACCACCTCCGCCGTCTCTCCGCCGTGGCAAGACATGTTCCGATCAGCCTCCACCCGCAAACCAGATCAACCCCAACCCCACCCACAACCACCACCATCACCATCACCATCACCACCACCGCAATCCACCACCACCACCACCACCTCCGGCGACCCTCATGCCCGTCTCGCACTCTACATCGCCATGGCTCACGCCGGATTAGCCTTCGCCATCTTCATCCTCTACGGCGTTTCCAAATTACTCGAAGAATACCTCCGACCAATCCTCTGGGCTGTTCTTTGCTCAATTCCCCTTAGAGGCATTCAGCAAACCCTAGTTTCGTTCTGGTCTGAACCCTTGCAATCAGGTCTTACAGACACTCTTCTCGCTGTACCTCTGTCTGTTTACAGGGTCTTCATCGGAACACTCGTTGAAATCAGAGACGTATTGCTCAAATTCCCCCGTCGGAAGACGAAGACCACACCGGATTCCGTAAAGAGAAAACGCAGTGGGTTCTCGATCTTGTTGAGATGGTTGGTGTCGTTTTGGGTGTTTGTAATGGCGTATGAACAGTTTGATGTTGTTGGTGCTGTTGTTCTGTTAGGGTTAGGGTTTATGTTTACTTCTAGCCATGTGAAGTCCACCATGTCTGCCGTTTCGTCGTTTGGAGGATCGAGCTTTCGACACAGTGGTAGTGGTGGTGGTGGTGATACTGCTTTTTTGACTAAAGGGATATTGAACAGATTGCAGACTATTGTTGCATTTGGGTTGATTGTTGGTATGATTGTTGGGTCTGTAACTGGGAGTATGTTTTTCGTGTATAAGATTGGGGTTGAAGGGAAGGATGTTGTTTATTCGGTTAAATCGCATGTTCAAGAGAACAATTATGCGGAGAAGATTGGGTTAAGGCAATGGATGGATGATAATGATGTTCCGGGGATGGTGGATAGATACACAACTCAGTTTTATGAAACTGTGAATGAACAGATTGATGGTTTAGCTGTGCAGTATAACGTGACGGAGATTGTTCAAGAAATGAAACAGTTGATTGGGCCGCGGTTGAACTTTAGCGCGAAGAATGCTTCTGCGCGTTCTACTGCTTTAGTGACCAGATCCGTGTACACTGAAAAGATACTGAGTTTGAAAAGGATGGTTGCTAATCGAGAATGGTCAGCGATTTATCCAGAAGTCAATGCTATGTTGAACGAGGCGCGTATTAGCAAGGCGGATATGATTGAAAGAGCAAAGGCAATTGCTTTTCAAGGGAAAGATGTGGCTCAACGTGTGCTCGCGAGTAGTAAATCGATTGTAGGTGGTGGGGGTAAGCTTGTTTTTGTAGTTATTGGTTCAATTGTTTCAGGGGCAGCGGAGTTTTTGAATTTTATCTCGCAGTCGATGGTTTTCATGGGGGTTTTATACTCACTGATAACGTCGGATTCTGGTGGCGTTACAGAACAAGTTATGAATATGATTCCGATTCCAAGATCCACTAGAATGCGGATTGTTGAGGTTCTTGATAAAGCTATTTCTGCTGTTCTTTTGGCTACAGCAGAGATTGCATTTTTTCAAGGGTGTCTCACTTGGCTTTTGTTTAGGTTATTTAACATTCATTTCTTGTATACATCAACGCTGCTCGCGTTTATTAACCCTTTGCTCCCGATATTTCCCAACTTTTTTTCAACAATCCCAGCAGCGTTGCAACTGGTGCTGGAAGGGAGATATATAGTTGCCATTTGTTTGTCAATTATTCATCTTGTTCTTCTAGACTACGGGATGACTGAAATTCAAGAGGACATACCTGGTCACAGCGCGTATCTTACCGGGCTTAGCATCATTGGTGGAGTCGCGTTGTTCCCATCTGCATTGGAGGGAGCGATATTGGGGCCATTGATAACAACTGTTCTCATTGCTCTCAAGGATTTGTATGTAGAATATATTTTGGATGAACCAAAAGAAGAGAAACAAGAGTAA 1980 45.35 MELVPYSDPTTTSAVSPPWQDMFRSASTRKPDQPQPHPQPPPSPSPSPPPQSTTTTTTSGDPHARLALYIAMAHAGLAFAIFILYGVSKLLEEYLRPILWAVLCSIPLRGIQQTLVSFWSEPLQSGLTDTLLAVPLSVYRVFIGTLVEIRDVLLKFPRRKTKTTPDSVKRKRSGFSILLRWLVSFWVFVMAYEQFDVVGAVVLLGLGFMFTSSHVKSTMSAVSSFGGSSFRHSGSGGGGDTAFLTKGILNRLQTIVAFGLIVGMIVGSVTGSMFFVYKIGVEGKDVVYSVKSHVQENNYAEKIGLRQWMDDNDVPGMVDRYTTQFYETVNEQIDGLAVQYNVTEIVQEMKQLIGPRLNFSAKNASARSTALVTRSVYTEKILSLKRMVANREWSAIYPEVNAMLNEARISKADMIERAKAIAFQGKDVAQRVLASSKSIVGGGGKLVFVVIGSIVSGAAEFLNFISQSMVFMGVLYSLITSDSGGVTEQVMNMIPIPRSTRMRIVEVLDKAISAVLLATAEIAFFQGCLTWLLFRLFNIHFLYTSTLLAFINPLLPIFPNFFSTIPAALQLVLEGRYIVAICLSIIHLVLLDYGMTEIQEDIPGHSAYLTGLSIIGGVALFPSALEGAILGPLITTVLIALKDLYVEYILDEPKEEKQE 659
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra11g02253 659 MobiDBLite consensus disorder prediction 33 51 - -
Fra11g02253 659 PANTHER TRANSMEMBRANE PROTEIN 22 658 IPR002549 -
Fra11g02253 659 MobiDBLite consensus disorder prediction 1 60 - -
Fra11g02253 659 MobiDBLite consensus disorder prediction 1 32 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra11g02253 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
89384 Fra11g02253 Fra16g01033
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr11:75725355 Fra16g01033 Fra-Chr16:42278138 dispersed
Fra Fra-Chr11:75725355 Fra2g01018 Fra-Chr2:62214162 wgd