AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra11g02321 ATGGAAGCCGCTAAAGATCAATTCTTGAAGGAATTCGGTGAATCTTATGGTTATCGGAATGCCCACAAGAGTATTGATGATATTCGGGCTACTGAGTTCAAAAGACTTGATGGGAATGTGTATTTGGATCATGCTGGTGCAACTTTGTATTCTGAGTTACAGATGGAGGCCATATTTAAAGATCTTACCACCAGTGTATATGGCAATCCCCATACTCAAAGCAGCTCTAGTTTAGCCACATCGGACATTATTGAAGACGCTCGTCATCAGGTTCTCAAACTGTGTAACGCGTCTCCAAAAGAATATAAATGTATATTCACTTCTGGGGCAACAGCAGCTCTTAAACTTGTTGGTGAAGCTTTTCCTTGGAGTAATGAGAGCACTTTCATGTATACAATTGAGAATCACAACAGTGTTCTCGGAATTAGAGAATATGCTCTAAATAACGGAGCTGCAGCATTAGCAATAGACTTTAAGGACGCTGCAGAGTCATCCTCCATAAAGGTTTTACATCATCCTATACAAAAGAGGAGTGAAGCTAGGGGTGTGGACAAACAGCCTACTGGCGAAATATACAATTTATTTGCCTTCCCTTCGGAGTGTAATTTCTCAGGAGTGAAGTTCAACCTCGATTTAGTAGACATAATTAAGGAAGATTCAGAGAAGTTATTGAAAGACTCTCAGCATTGCAGGGGAAACTGGATGGTTTTGCTTGATGCTGCAAAAGGCTGTTCTACGAACCCTCCAAATTTATCAATATACAAGGCAGATTTTGTTGTTATGTCATTTTACAAGCTTTTTGGATATCCAACTGGACTTGGAGCTTTGATAGTTCGAAATGAAGCTGCAAAGTTACTAAAGAAGACCTACTTTAGTGGAGGCACGGTGGCTGCATCAATTGCTGATATCGACTTTGTGAAAAGAAGAGAAGGAATTGAAGAATTATTCGAAGATGGAACCCTATCCTTCTTGAACATTGCATCCATTCGCCATGGATTTAACATTCTTAATACCTTGACCACATTATCCATATCAAGGCACACTTCATCTCTAGCAAGATATACTAGAAATATGCTTTTGGCATTAAGGCATGAAAATGGACAGGAGGCTTGCAAAATATATGGCCTGGAATATTTAACGGCAGCTTATAGCGGACTTGGCCCTACGGTTTCTTTCAACTTGAAACGGGCTGATGGTTCTTGGGTTGGCCCTCGGGAAGTGGAAAAATTGGCTTCTTTGTCTGGAATTCAGCTACGGACAGGATGTTTTTGCAATCCTGGCGCTTGTTCCAAGTATCTTGGTTTATCTCATGCAGATCTTCTATCCAACATTGAGGCTGGGCATGTTTGCTGGGATGACCTTGATATATTGCATGGAAAGCCGACTGGAGCTATTAGAGTATCTTTTGGTTATATGTCAACATTTGAAGATGCATGGAGATTCATGAACTTCATTGTAAGTTCCTTTGTCATGCTACCTACCAGTACATTGAGATCCAGATCTATCCGGTCTGCCACTGAAGGGGGTAGGACGACAACGTCAGAACATCATCTTACATCAATTGTTGTGTATCCGATAAAATCATGTGCAGGATTTAAAGTGGACAGCTGGCCTCTAAGCAGCACTGGATTGTTATATGATCGAGAATGGCTTCTCAAAAGCATGAATGGTGAAATTCTTACACAAAAGAAGGTGCCTGAATTGAACTTTATTGGTACAAAGATTGACCTCAAAACTGGAATGCTTCATGTGGAATCTCCACGGTGCAAAGAGAAGCTACATATCGAACTTAAATCAGATTTATCTGCTGCTGTAGAGGAAATCAGCATACATGCCCACAGATATGAAGTTATGGGCTATGATAACAAAATCGACACTTGGTTTAGTAATGCAGTTGGGCGGCCTTGTTATTTATTAAGATCTAGTTCCAAAGGTTGTACCCCTTTGAACAGAGGCAAAAACGCAAGCATATGCAGAGACATAAACACCAGATTAAGCTTTGTCAATGAAGCTCAGCTTTTACTGATATCCGAGGAAAGCTTATCTGACCTCAACCATAGATTAAACTCAAAAGTTAAAGAAGGGTCCGGTGGATTACCTATGGAAGTTAACGCAATGAGATTCCGGCCCAATCTTGTGATATCCGGTGGCAGGCCATATGCTGAAGACGGTTGGAATGGTCTTAAGATTGGAAATAATCACTTCATGTCGTTAGGCGGTTGCAATCGTTGCCAGATGATCAATTTGAATTATCAAGCCGGTGAGGTGCAGAGATCGAGCGAGCCTCTAGCTACTTTAGCAGCATACAGGAGAGCAAAGGGTAAAATACTGTTTGGAATTTTACTGAGATATGTGAGTGACAATGAGATGGATGATGAAATATCTTCATGGCTTCAAGTGGGACAAGAAGTGTACCCTGATGCATGA 2427 41.0 MEAAKDQFLKEFGESYGYRNAHKSIDDIRATEFKRLDGNVYLDHAGATLYSELQMEAIFKDLTTSVYGNPHTQSSSSLATSDIIEDARHQVLKLCNASPKEYKCIFTSGATAALKLVGEAFPWSNESTFMYTIENHNSVLGIREYALNNGAAALAIDFKDAAESSSIKVLHHPIQKRSEARGVDKQPTGEIYNLFAFPSECNFSGVKFNLDLVDIIKEDSEKLLKDSQHCRGNWMVLLDAAKGCSTNPPNLSIYKADFVVMSFYKLFGYPTGLGALIVRNEAAKLLKKTYFSGGTVAASIADIDFVKRREGIEELFEDGTLSFLNIASIRHGFNILNTLTTLSISRHTSSLARYTRNMLLALRHENGQEACKIYGLEYLTAAYSGLGPTVSFNLKRADGSWVGPREVEKLASLSGIQLRTGCFCNPGACSKYLGLSHADLLSNIEAGHVCWDDLDILHGKPTGAIRVSFGYMSTFEDAWRFMNFIVSSFVMLPTSTLRSRSIRSATEGGRTTTSEHHLTSIVVYPIKSCAGFKVDSWPLSSTGLLYDREWLLKSMNGEILTQKKVPELNFIGTKIDLKTGMLHVESPRCKEKLHIELKSDLSAAVEEISIHAHRYEVMGYDNKIDTWFSNAVGRPCYLLRSSSKGCTPLNRGKNASICRDINTRLSFVNEAQLLLISEESLSDLNHRLNSKVKEGSGGLPMEVNAMRFRPNLVISGGRPYAEDGWNGLKIGNNHFMSLGGCNRCQMINLNYQAGEVQRSSEPLATLAAYRRAKGKILFGILLRYVSDNEMDDEISSWLQVGQEVYPDA 808
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra11g02321 808 Hamap Molybdenum cofactor sulfurase [MOCOS]. 15 806 IPR028886 GO:0006777(InterPro)|GO:0008265(InterPro)
Fra11g02321 808 Gene3D - 55 338 IPR015421 -
Fra11g02321 808 SUPERFAMILY PLP-dependent transferases 32 486 IPR015424 -
Fra11g02321 808 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 4 490 - -
Fra11g02321 808 Pfam MOSC domain 663 804 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
Fra11g02321 808 Pfam Aminotransferase class-V 40 152 IPR000192 -
Fra11g02321 808 Pfam Aminotransferase class-V 232 478 IPR000192 -
Fra11g02321 808 Pfam MOSC N-terminal beta barrel domain 518 635 IPR005303 -
Fra11g02321 808 SUPERFAMILY MOSC N-terminal domain-like 518 647 - -
Fra11g02321 808 ProSiteProfiles MOSC domain profile. 641 807 IPR005302 GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra11g02321 K15631 molybdenum cofactor sulfurtransferase [EC:2.8.1.9]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr11:76919784 Fra12g01128 Fra-Chr12:13453519 dispersed
Fra Fra-Chr11:76919784 Fra12g00118 Fra-Chr12:1328009 transposed