AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra11g02324 ATGTCGGACCACAGCACCGTTAGTACAGCCAGCATGCCTGATTTCAACCTACCTGATGAAATTCTATCAGTAATCCCTGCGGATCCGTTCGATCAGCTAGATCTTGCTCGGAAGATCACTTCAATGGCGCTTGCGTCACGTGTTTCGAAGCTGGAGGCGGAGGCGGTGAAGCTGAGGCAGAAGTTGAGTGAGAAGGATCGTGTGGTGATGGAGCTTGAAGAGAAGGTGTCGGAGCTTCAGCAGACGTGTCATAGTGTTCAGATGAGGTTGCAGATTGCGGTTGAGGATAATAGGAAGGTTGTGGAGGAGAGAGATGCGTTGGCTGTGGCTGCTAAGAAATTAGGGCGCGATTTAGCTAAGCTTGAGGCATTCAAGCGGCAACTAATGCAGTCATTGAACGAAAACGATTCAAATCCTCATCCGGCAGCAACTGTAGACTTAGGCACCTATGATCAATCTGCTCCCAAAGCTTATCCAGTGAAAGAAGAGGAGACAAATGGCTATAGAAGGCACCATTCTTATAGTGGTTCTATTGATAGTGGAAACATACATGATGACGTCTCGAAGCTTGCCAGTCAAAGGTTTTCTCTGACCCCGTACATGAGCACACGTGTAACTCCATCTGCAACCCCCAAAACAATCTCTGCAAGTGTGTCTCCTAGAAGGTATTCTGCTTCTGGTGCTACATCCCCAACAAAATATAAATATGATGGTCGTACCTCAATGTCGTCATGGTACCCCTCAAGTCAGCAATCTTCAGCTGGAAACTCTCCTCCTCGTGGGCCCCCAATACCAGGCCGTGCTACTAAGATTGATGGAAAGGAGGTCTTCCGTCAAGCAAGGAGTCGACTATCTTATGAGCAGTTCAGTGCTTTTTTAGCAAATATAAAGGAGTTAAATGCTCAGAAGCAATCTCGTGAGGAGACTTTGAGGAAGGCGGAAGAAATATTCGGGTCTGATAACAAGGATCTTTATCTATCATTTCAAGCTCTACTAACTCGCAACAAACAATGA 1014 46.55 MSDHSTVSTASMPDFNLPDEILSVIPADPFDQLDLARKITSMALASRVSKLEAEAVKLRQKLSEKDRVVMELEEKVSELQQTCHSVQMRLQIAVEDNRKVVEERDALAVAAKKLGRDLAKLEAFKRQLMQSLNENDSNPHPAATVDLGTYDQSAPKAYPVKEEETNGYRRHHSYSGSIDSGNIHDDVSKLASQRFSLTPYMSTRVTPSATPKTISASVSPRRYSASGATSPTKYKYDGRTSMSSWYPSSQQSSAGNSPPRGPPIPGRATKIDGKEVFRQARSRLSYEQFSAFLANIKELNAQKQSREETLRKAEEIFGSDNKDLYLSFQALLTRNKQ 337
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra11g02324 337 MobiDBLite consensus disorder prediction 203 272 - -
Fra11g02324 337 MobiDBLite consensus disorder prediction 132 182 - -
Fra11g02324 337 MobiDBLite consensus disorder prediction 203 257 - -
Fra11g02324 337 Coils Coil 296 316 - -
Fra11g02324 337 Coils Coil 41 89 - -
Fra11g02324 337 PANTHER OS03G0659800 PROTEIN 14 335 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra11g02324 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr11:54246972 Fra11g02324 Fra-Chr11:76999069 dispersed
Fra Fra-Chr11:76999069 Fra2g01134 Fra-Chr2:63362594 dispersed