AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fra11g02334 | ATGGCATCTGCCTTCCTTTCAAGAACACTCTTTGCTCATCGTTTCGTTTCATCCTTCGGAATCAACCAAAACCCCCAAAAATTAGCTTCAGTTTTCTTTAAAAAACCTCTTCAATCGTGGGCTAGTCCAATCCATACGGCATATAGGAGGTCTACCTTGGTTCGTAGTGATATGGCAACAAATGTGGCTGGATCCACAGCTTATTTTTCAACACGGTCCATGTCGACTGGGGAGCCTGTTGTTTCGGTTGACTGGCTCCATGCCAACCTGCGTGAGCCTGATTTGAAGGTGCTGGATGCATCCTGGTACATGCCTGATGAACAAAGAAATCCGCTCCAGGAGTACCAGGTTGCCCACATCCCAGGTGCTCTTTTCTTTGATGTAGATGGGATATCAGATCGAACTACTAATCTACCACACATGTTGCCATCTGAGGAAGCATTTGCTGCTGCTGTTTCTGCTCTTGGTATTGAAAACAAAGATGGAGTTGTTGTTTATGATGGTAAAGGGATCTTCAGTGCTGCTCGTGTCTGGTGGATGTTCCGAGTTTTTGGACATGATAGAGTATGGGTGTTGGATGGAGGGCTTCCCAGATGGCGTGCTTCTGGATTTGATGTTGAGTCTAGTGCTTCTAGTGATTCAATTTTGAAAGCTAGTGCTGCAAGCGAGGCGATAGAGAAAGTATACCAAGGCCAGCCTGTTGGTCCAGTTACATTCCAAACAAAATATCAGCCACATCTTGTATGGACACTCGAACAGGTTAAAAAGAACATCGAGGACCAATCACATCAACACATAGATGCTCGATCAAAAGCCAGGTTTGATGGTGTTGCACCTGAGCCTCGAAAAGGAATAAGAAGCGGCCATGTGCCTGGGAGTAAGTGCATCCCTTTTGCCCAGATGTTAGACAGTTCACAGACACTGCTATCTGCAGACCAGCTCAAGAAAAAGTTTGAACAAGAGGGGATCGCATTGGACAAACCTGTCATGACTTCATGTGGGACTGGAGTTACTGCATGCATTCTTGCATTGGGACTCCATCGACTTGGGAAGACAGATGTTCCGGTTTATGATGGATCTTGGACAGAATGGGGAGCACAAGAAGAAGTTCCTGTCGCAACTTCAAGTTCAACTTCTTGA | 1140 | 45.88 | MASAFLSRTLFAHRFVSSFGINQNPQKLASVFFKKPLQSWASPIHTAYRRSTLVRSDMATNVAGSTAYFSTRSMSTGEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPLQEYQVAHIPGALFFDVDGISDRTTNLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGFDVESSASSDSILKASAASEAIEKVYQGQPVGPVTFQTKYQPHLVWTLEQVKKNIEDQSHQHIDARSKARFDGVAPEPRKGIRSGHVPGSKCIPFAQMLDSSQTLLSADQLKKKFEQEGIALDKPVMTSCGTGVTACILALGLHRLGKTDVPVYDGSWTEWGAQEEVPVATSSSTS | 379 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fra11g02334 | 379 | Coils | Coil | 251 | 271 | - | - | |
| Fra11g02334 | 379 | CDD | TST-Repeat-2 | 250 | 366 | - | - | |
| Fra11g02334 | 379 | ProSiteProfiles | Rhodanese domain profile. | 259 | 373 | IPR001763 | - | |
| Fra11g02334 | 379 | PANTHER | THIOSULFATE SULFERTANSFERASE | 76 | 376 | IPR045078 | GO:0004792(PANTHER)|GO:0005739(PANTHER)|GO:0016783(InterPro) | |
| Fra11g02334 | 379 | SMART | rhod-4 | 81 | 205 | IPR001763 | - | |
| Fra11g02334 | 379 | SMART | rhod-4 | 249 | 370 | IPR001763 | - | |
| Fra11g02334 | 379 | ProSitePatterns | Rhodanese signature 1. | 115 | 126 | IPR001307 | GO:0004792(InterPro) | |
| Fra11g02334 | 379 | SUPERFAMILY | Rhodanese-Cell cycle control phosphatase | 252 | 375 | IPR036873 | - | |
| Fra11g02334 | 379 | Gene3D | - | 73 | 215 | IPR036873 | - | |
| Fra11g02334 | 379 | SUPERFAMILY | Rhodanese-Cell cycle control phosphatase | 78 | 210 | IPR036873 | - | |
| Fra11g02334 | 379 | Pfam | Rhodanese-like domain | 250 | 366 | IPR001763 | - | |
| Fra11g02334 | 379 | Pfam | Rhodanese-like domain | 82 | 201 | IPR001763 | - | |
| Fra11g02334 | 379 | CDD | TST-Repeat-1 | 80 | 203 | - | - | |
| Fra11g02334 | 379 | ProSiteProfiles | Rhodanese domain profile. | 91 | 208 | IPR001763 | - | |
| Fra11g02334 | 379 | FunFam | Sulfurtransferase | 73 | 215 | - | - | |
| Fra11g02334 | 379 | ProSitePatterns | Rhodanese C-terminal signature. | 354 | 364 | IPR001307 | GO:0004792(InterPro) | |
| Fra11g02334 | 379 | MobiDBLite | consensus disorder prediction | 269 | 289 | - | - | |
| Fra11g02334 | 379 | Gene3D | - | 244 | 376 | IPR036873 | - | |
| Fra11g02334 | 379 | FunFam | Sulfurtransferase | 244 | 375 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fra11g02334 | K01011 | thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Fra1g00138 | . | 96 | 179 | Sulfurtransferasese/Rhodanese gene family | AT5G19370 | 34.021 | 2.41e-08 | 49.7 | |
| Fra1g00341 | . | 94 | 474 | Sulfurtransferasese/Rhodanese gene family | AT2G40760 | 75.591 | 0.0 | 595.0 | |
| Fra1g00474 | . | 82 | 257 | Sulfurtransferasese/Rhodanese gene family | AT4G01050 | 42.135 | 3.36e-31 | 120.0 | |
| Fra1g00539 | . | 10 | 257 | Sulfurtransferasese/Rhodanese gene family | AT4G01050 | 37.255 | 9.95e-32 | 122.0 | |
| Fra2g01251 | . | 10 | 116 | Sulfurtransferasese/Rhodanese gene family | AT5G66040 | 53.271 | 2.73e-39 | 127.0 | |
| Fra2g01716 | . | 1 | 456 | Sulfurtransferasese/Rhodanese gene family | AT4G01050 | 53.105 | 5.88e-140 | 407.0 | |
| Fra3g00202 | . | 1 | 464 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 69.362 | 0.0 | 661.0 | |
| Fra5g00826 | WGDA | 5 | 152 | Sulfurtransferasese/Rhodanese gene family | AT2G17850 | 48.322 | 1.38e-44 | 142.0 | |
| Fra5g00945 | . | 350 | 579 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 27.419 | 7.29e-18 | 79.7 | |
| Fra5g00987 | . | 350 | 579 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 27.823 | 4.84e-18 | 80.1 | |
| Fra6g00238 | . | 1 | 222 | Sulfurtransferasese/Rhodanese gene family | AT4G27700 | 67.672 | 6.46e-109 | 310.0 | |
| Fra7g00346 | . | 72 | 438 | Sulfurtransferasese/Rhodanese gene family | AT1G17850 | 63.102 | 1.41e-171 | 486.0 | |
| Fra7g00784 | . | 17 | 144 | Sulfurtransferasese/Rhodanese gene family | AT5G03455 | 70.769 | 1.12e-67 | 200.0 | |
| Fra7g01187 | . | 71 | 230 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 26.257 | 9.92e-06 | 46.2 | |
| Fra9g01650 | . | 49 | 216 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 29.508 | 7.81e-12 | 65.1 | |
| Fra11g02150 | . | 12 | 581 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 65.292 | 0.0 | 787.0 | |
| Fra11g02334 | . | 1 | 379 | Sulfurtransferasese/Rhodanese gene family | AT1G79230 | 71.802 | 0.0 | 580.0 | |
| Fra12g01307 | WGDA | 24 | 147 | Sulfurtransferasese/Rhodanese gene family | AT2G17850 | 53.6 | 9.12e-43 | 137.0 | |
| Fra14g00100 | . | 1 | 222 | Sulfurtransferasese/Rhodanese gene family | AT4G27700 | 68.722 | 2.79e-109 | 311.0 | |
| Fra15g00416 | . | 34 | 384 | Sulfurtransferasese/Rhodanese gene family | AT5G23060 | 66.097 | 6.38e-171 | 481.0 | |
| Fra16g00298 | . | 147 | 348 | Sulfurtransferasese/Rhodanese gene family | AT5G23060 | 30.918 | 5.97e-20 | 90.1 | |
| Fra16g00712 | . | 72 | 261 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 24.424 | 9.48e-11 | 61.6 | |
| Fra16g00995 | . | 94 | 299 | Sulfurtransferasese/Rhodanese gene family | AT5G19370 | 68.75 | 2.90e-106 | 309.0 | |
| Fra17g00200 | . | 344 | 577 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 28.112 | 1.16e-17 | 79.7 | |
| Fra17g00201 | . | 350 | 564 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 26.754 | 2.53e-16 | 76.6 | |
| Fra17g00370 | . | 1 | 231 | Sulfurtransferasese/Rhodanese gene family | AT2G42220 | 67.094 | 1.65e-112 | 320.0 | |
| Fra17g01207 | . | 1 | 292 | Sulfurtransferasese/Rhodanese gene family | AT4G24750 | 65.552 | 1.55e-141 | 398.0 | |
| Fra18g01828 | . | 7 | 198 | Sulfurtransferasese/Rhodanese gene family | AT3G08920 | 58.883 | 2.42e-84 | 247.0 | |
| Fra10000119.1g00001 | . | 45 | 181 | Sulfurtransferasese/Rhodanese gene family | AT4G35770 | 63.504 | 1.61e-60 | 185.0 |