AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra11g02348 ATGGTGCATCCGGCGATTGAACCTCTGTCGTACCTCATCGGAACTTGGAGAGGTGAAGGTGAAGGTGGTTTCCCCACAATATCATCTTTCAGTTACGGTGAAGAGCTCAATTTCACTCATACAGGAAACAAGCCCGTAATAGCTTATTCTCAGAAGACTTGGAAACTGAATTCTGGAGAGCCCATGCATGCTGAGAGCGGCTACTGGAGGCCGAAACCTGATGGAACTATTGAGGTTGTCATTGCACAGAGCACTGGTCTTGTTGAAGTGCAGAAAGGAACATATGATGCAGAAAAGAAAGTGGTGAAGCTTCAAAGTGAGCTTGTTGGAAATGCTTCAAAGGTTAAAGAGATAACTCGAGTTTTTACTCTGGTTAATGAAGAATTATCTTATGTGGTCGAGATGGCTACTAGTCTCACCAATCTTCAACCACATCTGAAAGCTTCTCTTAAAAAGCTCTAA 462 43.29 MVHPAIEPLSYLIGTWRGEGEGGFPTISSFSYGEELNFTHTGNKPVIAYSQKTWKLNSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYDAEKKVVKLQSELVGNASKVKEITRVFTLVNEELSYVVEMATSLTNLQPHLKASLKKL 153
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra11g02348 153 SUPERFAMILY Lipocalins 2 152 IPR012674 -
Fra11g02348 153 CDD lipocalin-heme-bd-THAP4-like 6 152 IPR014878 -
Fra11g02348 153 Pfam THAP4-like, heme-binding beta-barrel domain 6 152 IPR014878 -
Fra11g02348 153 PANTHER THAP4 PROTEIN 2 153 IPR045165 -
Fra11g02348 153 Gene3D - 1 153 IPR012674 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra11g02348 K23205 THAP domain-containing protein 4