AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra11g02376 ATGGCACCCCCTTCATCATCATCATCCACCTTCATCTCCAAAACCCACTTCACAACAACCCTAATCATCATCACCCTCTTCACTTGTACCCTCACTCCCAACGTACAAGCCCTCAAAGCACCAATTCGCCCAGAAGACATACTCCCCCTTTTGCCCCGTCAAGTTTCATGGCCTCTGCTCAACAACCTCCGCGGTGCCGCCGATCTCCTCCCCAGCTTCGTCGGCGCCGCCGCGGTGGCCAATAACTCCGGTTTGCATTGGAAAGGCTCGTGCTTTTATGACAACACTGCGTGGTTAGAGCTGCATAATAAAAGTGGTAGTGAGTTTGGTGGGGGTACTCTTCATATTAAGGTAAGCAATGCACACAGTTGGACTTGTATGGATATTTATGTCTTTGCGACTCCTTATCGTGTGACGTGGGACTACTATTTTTTGTCGCGTGAGCATACACTTGAGTTCGATGAATGGAGTGGGAAAGCTGAGTACGAATATGTGAAACATAAAGGAGTTTCAATTTTTCTCATGGAAGCAGGAATGATAGGAACCCTAGAAGCATTATGGGAGGTCTTCCCTTTATTCACAAATACAGGGTGGGGGGAGAGTTCTAATCTTGCTTTTCTCAAGAAACATATGGGAGCTACATTTGAAGCACGGCCCGAACCATGGGTAACAAACATAACCCAAGATGATATCCATTCAGGGGACTTCCTTGCAATATCAAAAATTCGCGGTAGGTGGGGCGGGTTTGAGACCCTTGAAAAATGGGTATCCGGGGCATATGCAGGTCATTCTGCTGTCTGCTTGAGGGACCCAGAAGGAAAACTATGGGTTGGTGAATCTGGACATGAAGATGAAGAGGGCCAGGATGTTATTGCTTTGTTGCCATGGGATGAGTGGTGGGAATTTGAGTTGACTAAAGATGATGCTAATCCACATATTGCTTTGCTTCCTTTGCATCCCGATCTACGGTCTAGATTTAATGAAACTGCTGCTTGGGAGTATGCACAAAGTATGGTTGGGTTGCCATATGGTTATCATAACTTGATATTTAGTTGGATAGATACTGTCAGTGATAACTATCCACCACCTTTGGATGCTAATCTGGTTGCATCTGTTATGACAGTGTGGGATCAAATGCAGCCTGCATATGCAGCTAATATGTGGAATGAAGCCTTGAATAAACGGCTTGGTACTGAGGGCCTTGAACTTGCTGATATTTTAGTGGAAGTTGAAAGGCGTGGTTCATCTTTTGCTGAATTACTGACTATACCCGAACAAGATGATTGGGTATACGCTGATGGAAAGTCAACTTCTTGTGTTGCTTTCGTCCTTGAGATGTACAAAGAAGCAGGGCTTTTTGGAGATCTTGCAGACCAAATTCAAGTTACTGAATTTACGATAAAGGATGCTTACACGCTCAACTTCTATGAAAACAATTCGAGCCGCCTGCCAAAGTGGTGTAATGAAGGCGACACGGTTGACCTTCCATTTTGTCAAATCAAAGGAAAATATCGAATGGAATTACCTGGATACAATACCATTGACCCGTACCCACATATGACAGAGAAATGCCCATCACTACCCCCAGATTATTCAAGACCTCAGTACTGCTGA 1614 44.92 MAPPSSSSSTFISKTHFTTTLIIITLFTCTLTPNVQALKAPIRPEDILPLLPRQVSWPLLNNLRGAADLLPSFVGAAAVANNSGLHWKGSCFYDNTAWLELHNKSGSEFGGGTLHIKVSNAHSWTCMDIYVFATPYRVTWDYYFLSREHTLEFDEWSGKAEYEYVKHKGVSIFLMEAGMIGTLEALWEVFPLFTNTGWGESSNLAFLKKHMGATFEARPEPWVTNITQDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDPEGKLWVGESGHEDEEGQDVIALLPWDEWWEFELTKDDANPHIALLPLHPDLRSRFNETAAWEYAQSMVGLPYGYHNLIFSWIDTVSDNYPPPLDANLVASVMTVWDQMQPAYAANMWNEALNKRLGTEGLELADILVEVERRGSSFAELLTIPEQDDWVYADGKSTSCVAFVLEMYKEAGLFGDLADQIQVTEFTIKDAYTLNFYENNSSRLPKWCNEGDTVDLPFCQIKGKYRMELPGYNTIDPYPHMTEKCPSLPPDYSRPQYC 537
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra11g02376 537 PANTHER OS01G0793500 PROTEIN 17 537 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra11g02376 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
89397 Fra11g02376 Fra3g00184
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2433697 Fra Fra11g02376 Fra-Chr11:77469968 Fra13g00735 Fra-Chr13:34678284
2478118 Fra Fra11g02376 Fra-Chr11:77469968 Fra3g00184 Fra-Chr3:4892410