AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra11g02437 ATGACGCATAAACAAGAGACTTTGCTTGGTTCTGGAGCTTGTGTAGCAGTTACTGTCCTTTTATCATTGAAGCTGTTTAGTGATCATCTTTCTCATTGGAAGAAACCCAAAGAACAGAAGGCGATTCTAGTGATTATTCTCATGGCACCTATTTATGCTGTTGATTCTTATGTTGGGTTGCTTGATATTCGTGGCAGTGAGACGTTTTTTGTGTTCCTGGATTCGATTAAAGAATGCTACGAGGGTCTGGTGATGGCCAAGTTCTTGGCTTTGTTGTACACTTATTTGAATATATCTATTAGCAAGAACATAGTCCCTGATGAGATCAAAGGAAGAGAGATCCACCATTCATTTCCAATGACTCTCTTTCAACCTCATACGGTTCGTTTGAACCATCAAAACCTAAAGCTCCTTAAGTATTGGACATGGCAGTTTGTAGTGATCCGCCCTGTGTGCTCTGTCTTGATGATAGTTTTGCAAATGCTTGACATGTATCCCGATTGGCTTAGCTGGACAATCACTATGATCTTGAATGTATCAGTTTCCTTAGCATTATACGCACTCGTGGTTTTCTATCATGTATTTGCTAAAGAACTGGCACCACACAAGCCCCTTGCCAAGTTCTTATGCGTCAAAGGGATCGTTTTCTTCTGTTTTTGGCAGGGAGTTGTACTGAGTGGTCTGGTGGCAATGGGCATAATCAGGTCCAATCACTTCTGGCTTGATGTGGCGCATATCCAGCAAGCGCTGCAAAACGCATTGGTGATCTTTGAGATGGTGTTTTTCTCAATCTTTCAGCTGTATGCATACTCTGCTGCACCATACAAGGATCTTGATTTGAAAGAGAAGAAGAAAGAGTGA 861 41.7 MTHKQETLLGSGACVAVTVLLSLKLFSDHLSHWKKPKEQKAILVIILMAPIYAVDSYVGLLDIRGSETFFVFLDSIKECYEGLVMAKFLALLYTYLNISISKNIVPDEIKGREIHHSFPMTLFQPHTVRLNHQNLKLLKYWTWQFVVIRPVCSVLMIVLQMLDMYPDWLSWTITMILNVSVSLALYALVVFYHVFAKELAPHKPLAKFLCVKGIVFFCFWQGVVLSGLVAMGIIRSNHFWLDVAHIQQALQNALVIFEMVFFSIFQLYAYSAAPYKDLDLKEKKKE 286
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra11g02437 286 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 7 279 IPR005178 GO:0005215(PANTHER)|GO:0006810(PANTHER)|GO:0016021(PANTHER)
Fra11g02437 286 SMART Solute-trans-a-2 7 275 IPR005178 -
Fra11g02437 286 Pfam Organic solute transporter Ostalpha 9 275 IPR005178 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra11g02437 K14360 organic solute transporter subunit alpha
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Event-related genes

Select Gene_1 Gene_2 Event_name
89411 Fra11g02437 Fra3g00108
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr11:78088973 Fra3g00264 Fra-Chr3:5802322 dispersed