AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra11g02441 ATGGGAAGAGCAGGAAGAGATTGGACTCAGATCTACGCAATATACGGGATGGATGATTGGCACACACCGATATTCCTTTTAATTCACGCGATCATCTTCTCCGCTTCATCGATCTTCTTCCTCCTATACTTCAACCGCATCTGCTACCTCTTCGAATCACTAGAACCTTCACTATTCTCCACCAGTTTCTCCCGCTTCACCGCCGGATTCACCGGCTCCGTCATGGCTCTCTCCGCCGTCTGCCTCTTCTACGCCGCCGGCAACATGTTCTACTCCTCCGTCGCCCTCCGCTGGGACATGGCGCAGCGGATGCTCTCCGCCGTGCACGACTGGTCCTCCGTCAAAACCGTCCTCGACGTCGGCTGCAGCCGCGGCGTCCTCCTCAACGCCGTCGCGATGGAGCTGAAGAAGCACGGCAGCTCCGGCAGCGTCGTAGGGTTAGACCGTAAAACCACCACGCTAACCACCCTCCGCACGGCGGCGACGGAGGGCGTTCAGGAGTACGTCACGTTCCGTGAGGGTGACGCTCGCCGGCTTCCGTTCCCGGACAACCACTTCGACGTGGTGGTCTCGGCGGCGTTTGTTCACAAGGTGGGGAAGGAATTTGGCGCGAAGAGCGCGGCGGCGGCGGCGGAGAGGATGAGGGCGGTGGGGGAGGTGGTGAGGGTGATGAAGGAGGGTGGCGTAGGGGTGGTGTGGGACCTGGTGCACGTGCCGGAGTATGTGCTCCGGTTACAGGAGTTGAAGATGGAGGAGATTAGAGTGTCGGAGAGGGTAACGGCGTTTATGGTTAACAGCCATATCGTGTCGTTTCGGAAGCCCACACAGCACGTGATAGGGCCCAGTGAAGTCAGATTGGATTGGAGATTCAACAATGTGTTTTGA 885 58.53 MGRAGRDWTQIYAIYGMDDWHTPIFLLIHAIIFSASSIFFLLYFNRICYLFESLEPSLFSTSFSRFTAGFTGSVMALSAVCLFYAAGNMFYSSVALRWDMAQRMLSAVHDWSSVKTVLDVGCSRGVLLNAVAMELKKHGSSGSVVGLDRKTTTLTTLRTAATEGVQEYVTFREGDARRLPFPDNHFDVVVSAAFVHKVGKEFGAKSAAAAAERMRAVGEVVRVMKEGGVGVVWDLVHVPEYVLRLQELKMEEIRVSERVTAFMVNSHIVSFRKPTQHVIGPSEVRLDWRFNNVF 294
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra11g02441 294 PANTHER EXPRESSED PROTEIN 1 289 - -
Fra11g02441 294 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 91 247 IPR029063 -
Fra11g02441 294 Gene3D Vaccinia Virus protein VP39 84 261 IPR029063 -
Fra11g02441 294 CDD AdoMet-MTases 116 236 - -
Fra11g02441 294 Pfam Methyltransferase domain 118 230 IPR013216 GO:0008757(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra11g02441 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr11:78131277 Fra3g00147 Fra-Chr3:4342595 dispersed
Fra Fra-Chr11:78131277 Fra16g00804 Fra-Chr16:39697686 wgd