AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fra11g02464 ATGGATATCATCACATCACCACCACCACCACCACCACCACCACCACACCACGACGGAGACCACCCATCTCCGGCGACCTCCACCACCACAACCACCACCCAAACGCCACCACTAACTCCACGACCCGTTTCACGACCCGACCCAAACCCATACCCAACAACCTTCGTTCAAGCCGACACCACCTCCTTCAAACAAGTAGTCCAGATGCTCACCGGATCATCCAAACCGACCCACCACCCAGATCCGACTCCGGCGAAAGGATCCATCCCGCCGGTCAAAACCGGTCAACAGAAGAAATTCAAGCTCTACGAACGCCGAAACACCCTCAAAAACGGGTTGATGATCAACCCATCGGGTTCGAGATTCGGGTCTCCGGCGAGAGTACCCGAATTGCTGTCACCGAGTGTTCTTGATTTTCCGGCGTTGGTGTTGAGTCCGGTGACGCCGTTGACGGAGGATCCGTTTAATAAGTCGTCTTCTTCGTCGTCGGAGGAGGAGAGGGTGATTAAGGAAAAAGGGTTTTACTTACATCCGTCGCCTAGGGCGGCGACGCCGCGTGCGGCGGCGGAGCCACGGTTGTTGCCGCTGTTTCCGGTGACGTCGCCGCGGGTGTCGGAGTCGTCTATTTAG 630 56.98 MDIITSPPPPPPPPPHHDGDHPSPATSTTTTTTQTPPLTPRPVSRPDPNPYPTTFVQADTTSFKQVVQMLTGSSKPTHHPDPTPAKGSIPPVKTGQQKKFKLYERRNTLKNGLMINPSGSRFGSPARVPELLSPSVLDFPALVLSPVTPLTEDPFNKSSSSSSEEERVIKEKGFYLHPSPRAATPRAAAEPRLLPLFPVTSPRVSESSI 209
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fra11g02464 209 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 31 205 IPR039611 -
Fra11g02464 209 MobiDBLite consensus disorder prediction 1 20 - -
Fra11g02464 209 MobiDBLite consensus disorder prediction 150 187 - -
Fra11g02464 209 MobiDBLite consensus disorder prediction 50 78 - -
Fra11g02464 209 Pfam VQ motif 50 75 IPR008889 -
Fra11g02464 209 MobiDBLite consensus disorder prediction 1 98 - -
Fra11g02464 209 MobiDBLite consensus disorder prediction 22 38 - -
Fra11g02464 209 MobiDBLite consensus disorder prediction 159 174 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fra11g02464 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
89419 Fra11g02464 Fra8g00967
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fra Fra-Chr11:78350814 Fra13g00288 Fra-Chr13:27016346 dispersed
Fra Fra-Chr11:1140715 Fra11g02464 Fra-Chr11:78350814 wgd
Fra Fra-Chr11:78350814 Fra4g00528 Fra-Chr4:43499600 wgd
Fra Fra-Chr11:78350814 Fra8g00967 Fra-Chr8:9161519 wgd